Gene Information

Name : YPTS_1193 (YPTS_1193)
Accession : YP_001871625.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1340231 - 1341064 bp
Length : 834 bp
Strand : -
Note : KEGG: ent:Ent638_0478 hypothetical protein

DNA sequence :
ATGCAAACAGAATCCGACCTCTTAACGGAACACAATGAACTTATTATCTCGACCAGTATTGAACGGACTGTGACAGGACG
TAATTCCGCACTGGCTCAAATTGAGCAACTAATCCAACAGGTTGATAAGGTATCCCGACTCACCTCAGAAGTGGGCGGCG
GAACGGCGCAGGACTGGGCCATGAATTCCGGGCACCGATATAACAGTTGGCTAACCGAAACGACTGAGAAAGCGATGCCC
GCTATAACACGTAATATTGACCGCAGTATCTGGCGCGATTTGATGCTGAAGTCCGGCATGATGGCCTTGATGGATGCGCA
GGCTCGTGACCAGTGGCATAAAAACCTGGAAGAGGGAGACCTTCCTGCCATTAGCGAAGCCAATATCCTCAGTACCTTTA
AGCAGTTACATCTGAATAAAAGGGATGTCTTTGAGCGCGGTATTATCAATGTCTTCAAAGGGCTGTCATGGGATTACAAA
ACTAATAGCCCTTGTTGTTTTCGGAAAAAGATCATCATTAACAATCTGGTTACGCATAACCGTTGGGGATTTAGTCTTAA
CTGGGGCTGGCGGCGCGATCAGCTGGCAGATTTGGAACGAATGCTGTTTCTGCTGGATGGTAAACCCATCCCTGATAATC
GAAGTGATATCTCAACTCGATTGATGGAGCATATTCGTGATAACCCGACTAAGGAATCCTATGAAGATGCGTTATTCAAT
ATTCGTTACTTTCAGAAGGGAACCGGACACATCACTTTTAAACGCCCTGACCTGAAAGAAAAGATGAATGATATTGTGGC
AAAACACTACCCAAGAATGTTAGCCTCCAGATAA

Protein sequence :
MQTESDLLTEHNELIISTSIERTVTGRNSALAQIEQLIQQVDKVSRLTSEVGGGTAQDWAMNSGHRYNSWLTETTEKAMP
AITRNIDRSIWRDLMLKSGMMALMDAQARDQWHKNLEEGDLPAISEANILSTFKQLHLNKRDVFERGIINVFKGLSWDYK
TNSPCCFRKKIIINNLVTHNRWGFSLNWGWRRDQLADLERMLFLLDGKPIPDNRSDISTRLMEHIRDNPTKESYEDALFN
IRYFQKGTGHITFKRPDLKEKMNDIVAKHYPRMLASR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 7e-80 59
unnamed AAL57572.1 unknown Not tested LEE Protein 3e-77 59
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 7e-78 59
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 5e-79 59
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 5e-79 59
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 3e-77 59
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-78 58
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-78 58
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 1e-74 57
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 1e-74 57
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 1e-76 57
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 1e-74 57
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 2e-75 56
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 1e-75 56
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 3e-71 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTS_1193 YP_001871625.1 hypothetical protein VFG1533 Protein 4e-78 59
YPTS_1193 YP_001871625.1 hypothetical protein VFG0666 Protein 6e-75 57
YPTS_1193 YP_001871625.1 hypothetical protein VFG1685 Protein 2e-71 55