Gene Information

Name : YPTS_1077 (YPTS_1077)
Accession : YP_001871513.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein YbbA
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1218311 - 1218997 bp
Length : 687 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ypi:YpsIP31758_3020 putatitve ABC transporter, ATP-binding protein

DNA sequence : 
ATGCCAGCGGAAAACGTTCTTGAAGTTCATCATCTTAATAAGCACGTCGGTCAGGGTGAGCAACAGCTCTCCATCCTTAC
CGGAGTTGAGCTGGTTGTCAAACCTGCCCAGACAATTGCGCTAATTGGCGAGTCGGGTTCAGGCAAATCAACATTATTGG
GGATTCTGGCCGGGCTGGATGATGGCAGCAGCGGTGATGTGAGCTTGCTTGGGCAGTCATTGACCACGATGGATGAAGAA
GGTCGCGCGCTACTCCGGGCGAAAAATGTCGGCTTTGTCTTTCAGTCATTTATGTTGGTTCCTACATTGAACACGCTTGA
AAACGTTCAACTACCAGCATTACTCCGTGGTGAGAGTGATCGCCAAAGCAAAGCGCAAGCTATTGAATTATTGGAGCAAC
TTGGGCTGGGTAAGCGCCTTTACCATCTTCCCGCCCAGCTTTCCGGTGGTGAACAACAGCGGGTTGCACTGGCCAGGGCT
TTCAGTGGGCGGCCAAAAATCTTATTTGCTGATGAGCCAACCGGTAATCTTGACCGGCAGACGGGTGATCGTATCGCTGA
TTTGCTGTTTTCCCTAAACCGGGATTTCGCGACCACGTTGATTCTGGTCACACATGATGAACAACTGGCCGGTCGCTGTC
AGCGTCGGTTGCGCCTGCGGGACGGTAAATTGTGGGAGGAGTCATGA

Protein sequence : 
MPAENVLEVHHLNKHVGQGEQQLSILTGVELVVKPAQTIALIGESGSGKSTLLGILAGLDDGSSGDVSLLGQSLTTMDEE
GRALLRAKNVGFVFQSFMLVPTLNTLENVQLPALLRGESDRQSKAQAIELLEQLGLGKRLYHLPAQLSGGEQQRVALARA
FSGRPKILFADEPTGNLDRQTGDRIADLLFSLNRDFATTLILVTHDEQLAGRCQRRLRLRDGKLWEES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-30 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTS_1077 YP_001871513.1 putative ABC transporter ATP-binding protein YbbA NC_008702.1.4606598. Protein 5e-34 45
YPTS_1077 YP_001871513.1 putative ABC transporter ATP-binding protein YbbA NC_012469.1.7686878. Protein 4e-38 43
YPTS_1077 YP_001871513.1 putative ABC transporter ATP-binding protein YbbA CP001581.1.gene798.p Protein 1e-35 41