Gene Information

Name : Npun_F0008 (Npun_F0008)
Accession : YP_001863754.1
Strain : Nostoc punctiforme PCC 73102
Genome accession: NC_010628
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 3.5.4.26
Position : 15003 - 16226 bp
Length : 1224 bp
Strand : +
Note : TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: ava:Ava_1457 riboflavin biosynthesis protein RibD

DNA sequence :
ATGGATAATTCCCCAGTGGTCGCTCAAACAGATGCATCCTTACCAAATTACACTCAGGAAAATATACATCTAGTGGAGTC
AGCAGTTATAAAAGAAAAGATCGGAACTGATTTTGACTCTCGCATGATGCTGCGGTGTTTGGAACTTGCTCGCCGCGCTT
TAGGACGGACTTCCCCAAATCCTTTAGTGGGAGCGGTGATTGTCAAGGATGGCGAGATTGTCGGCGAAGGGTTTCATCCG
CGTGCAGGTGAGCCTCATGCAGAAGTGTTTGCTTTGCAAGCAGCAGGCGTTGGCGCAGCCTCTCCCCAGGAGAATCGCGC
TCGTGGTGCAACAATCTATGTCAACCTTGAGCCTTGCAATCATTACGGACGGACTCCCCCTTGTTCGGAAGGATTGATCC
AAGCTGGAGTAGCAAAAGTCGTAGTGGGTATGGTTGATCCCAATCCACTGGTAGCTGGAGGTGGTATTGCCCGTTTACGT
GCGGCTGGGATCGAAGTGTTAGTAGGAGTAGAAGAATCAGCTTGTCATCAGCTAAATGAAGCTTTTGTACATCGCATTCT
CTACAAACGACCTTTGGGAATTTTAAAATATGCCATGACTTTAGATGGCAAAATTGCTACTACCTCTGGTCATAGCGCCT
GGGTGACAAGCCAAGAGGCCCGCAGTGAAGTACATCAACTACGGGCGGCTTGCGATGCAATAATTGTCGGCGGAAATACA
GTCCGACAAGATAATCCTTATTTAACCAGCCATCATCTGGAAGCACATAATCCCCTGCGGGTGGTGATGAGTCGTCATCT
CAACTTACCGGAAAGTGCCCATCTGTGGAAAACTGCGGATGCTCCAACTTTGGTGTTGACTCAAAAGGGCGCTAACCCCG
ATTTCCAAGAACTGTTGCTCAACCAGGGGGTGGAAATCGTGGAATTAACATCACTTACACCAGATAACGCAATGGCGTAC
TTATATGAGCGGGGTTTTTGTAGCGTCTTATGGGAATGTGGCGGTACCTTAGCTGCTAGTGCGATCGCTCAAGGAGCAGT
GCAAAAAGTTTTGGCATTTATTGCCCCAAAAATCATTGGTGGTAGCATTGCTCCCACACCAGTGGGCGATTTAGGTTTTA
CTACCATGACTGAGGCATTGTCTCTAGAACGTGTTCGTTGGCGTGTAGTAGGCTCAGACTGCTTGGTGGAGGGTTATTTT
TCCCAAAAAGCCAATAGTCAATAG

Protein sequence :
MDNSPVVAQTDASLPNYTQENIHLVESAVIKEKIGTDFDSRMMLRCLELARRALGRTSPNPLVGAVIVKDGEIVGEGFHP
RAGEPHAEVFALQAAGVGAASPQENRARGATIYVNLEPCNHYGRTPPCSEGLIQAGVAKVVVGMVDPNPLVAGGGIARLR
AAGIEVLVGVEESACHQLNEAFVHRILYKRPLGILKYAMTLDGKIATTSGHSAWVTSQEARSEVHQLRAACDAIIVGGNT
VRQDNPYLTSHHLEAHNPLRVVMSRHLNLPESAHLWKTADAPTLVLTQKGANPDFQELLLNQGVEIVELTSLTPDNAMAY
LYERGFCSVLWECGGTLAASAIAQGAVQKVLAFIAPKIIGGSIAPTPVGDLGFTTMTEALSLERVRWRVVGSDCLVEGYF
SQKANSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 6e-41 41
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 6e-41 41