Gene Information

Name : Npun_R6022 (Npun_R6022)
Accession : YP_001869255.1
Strain : Nostoc punctiforme PCC 73102
Genome accession: NC_010628
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.25
Position : 7442643 - 7443425 bp
Length : 783 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ava:Ava_4898 ABC transporter-like

DNA sequence : 
ATGCCACTCGAACTGCAAAACCTCACAGGCGGTTACACCACAGTACCAATTGTTCAAGACATTAATCTGACTCTGCAAAC
AGGAGAATGGTTGAGTTTAGTTGGTGCTAATGGTTCAGGTAAATCTACTTTATTAAAATTGCTGAGTCGTATTCTTTCCC
CACAGCAAGGAACAGTTCTACTTGATGGCAAAGCAATTCATTCCCAACCCCCAAATATAGTTGCACAGAAACTAGCATTA
TTACCGCAACAACAAACGGTTCCCGTGGGCTTAACAGTGCGACAATTAGTAAGTTTGGGACGCACGCCACATCAATCTTG
GTGGCAATGGGAATTAAACGCTCAAGATTGGGTGAAAGTAGAAGTTGCAATTAAAAAGACGCAACTAGAAAAATTGAGCG
ATCGCTTAGTTGAACAACTTTCCGGTGGTGAAAGACAACGCGCTTTTTTAGCTTTAGCACTAGCGCAAGAACCAAAAGTT
TTATTATTAGACGAACCTACAACTTTTTTAGATATCAACTATCAATTACAATTATTGGAATTACTAAAAAATCTGAATCA
ACAGCAAGAATTAACTATTGTTACAGTTCTACACGAACTAAACCTAGCGGCACGATACAGTTCTCGCATTGCTTTATTAA
AACAAGGTCATCTTTGGGAAGTTGGTAAACCTGAAGAAGTTTTGACACCAAATGCGATCGCTCAAGTATTTGGTGTGGAA
TCTGTGATTATCCAGACACCTGTGGGTTTACAAGTTTGTGCAATTTCTGCTGTGTCAGCATAA

Protein sequence : 
MPLELQNLTGGYTTVPIVQDINLTLQTGEWLSLVGANGSGKSTLLKLLSRILSPQQGTVLLDGKAIHSQPPNIVAQKLAL
LPQQQTVPVGLTVRQLVSLGRTPHQSWWQWELNAQDWVKVEVAIKKTQLEKLSDRLVEQLSGGERQRAFLALALAQEPKV
LLLDEPTTFLDINYQLQLLELLKNLNQQQELTIVTVLHELNLAARYSSRIALLKQGHLWEVGKPEEVLTPNAIAQVFGVE
SVIIQTPVGLQVCAISAVSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 6e-38 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-31 44
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-31 44
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-32 43
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 9e-27 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-27 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-27 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 8e-27 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Npun_R6022 YP_001869255.1 ABC transporter BAC0164 Protein 4e-38 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Npun_R6022 YP_001869255.1 ABC transporter VFG1042 Protein 3e-38 46
Npun_R6022 YP_001869255.1 ABC transporter VFG0925 Protein 5e-28 42