Gene Information

Name : Npun_R5387 (Npun_R5387)
Accession : YP_001868643.1
Strain : Nostoc punctiforme PCC 73102
Genome accession: NC_010628
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 6663837 - 6665258 bp
Length : 1422 bp
Strand : -
Note : TIGRFAM: glutamine synthetase; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; KEGG: ava:Ava_0147 glutamine synthetase type I

DNA sequence :
ATGACTACACCACAAGAACTCTTGAAGAAAATTCAAGATGAAAAAATTCAGCTGATTGATCTCAAATTCATCGATACAGT
AGGGACTTGGCAGCACCTCACACTGTACCAAAACCAAATCGATGAAACTGCATTCACTGATGGCGTACCTTTTGACGGTT
CCAGCATCCGGGGTTGGAAAGCGATCAACGAATCGGACATGACGATGGTACTCGACCCCAACACTGCTTGGATCGACCCA
TTCATGGAAGTGCCAACACTAAGTATAATTTGTAGTATTAAAGACCCCCGGACGGGTGAACCCTATAACCGTTGCCCACG
GGTTATTGCCCAAAAAGCAGTAGATTACCTGGTTGCCAGTGGCATCGGTGATACAGTCTTCTTTGGCCCTGAAGCTGAGT
TCTTTCTCTTTGATAGTGCTAGGTTTGCCCAAACCGCTAACGAAGGCTACTACTTCTTAGACTCCGAAGAAGGTGCTTGG
AATTCCGGTAAAGAGGGTACAGCCGAAAAACCCAACTTGGGTTACAAACCACGCTTCAAAGAAGGTTACTTCCCAGTCGC
ACCGACGGATTCTTTCCAAGATATTCGTACAGAGATGCTGTTGACAATGGCAGAATTAGGTGTACCCATTGAAAAACATC
ACCACGAAGTTGCTACTGGTGGTCAGTGCGAACTAGGTTTCCGTTTTGGTAAGTTGATCGAAGCGGCTGACTGGTTGATG
ACTTACAAATATGTCATCAAGAACGTTGCCAAGAAACACAACAAAACCGTTACCTTCATGCCAAAACCGATTTTTGGCGA
TAACGGTTCAGGAATGCACTGTCACCAGTCCATCTGGAAAGACGGCCAACCTCTGTTTGCAGGTGATAAGTATGCCGGTT
TGAGCGACATGGCATTGTACTACATCGGTGGTCTTCTCAAACACGCACCAGCGCTGTTAGCAATTACCAACCCCAGCACC
AACTCATACAAGCGCCTAGTACCTGGTTATGAAGCTCCTGTTAACTTGGCTTACTCCGAAGGGAACCGTTCTGCTTCTAT
CCGTATTCCTCTATCTGGTAAGAACCCCAAAGCCAAGCGTTTAGAATTCCGTTGTCCAGATGCTACATCTAACCCCTACT
TGGCATTTGCTGCAATGCTTTGTGCTGGTATCGATGGTATCAAGAACAAAATCCATCCTGGTGAACCCTTAGATAAGAAT
ATCTATGAACTCTCTCCAGAAGAGCTTGCAAAGGTTCCCTCAACTCCAAGTTCTTTAGAACTGGCATTGCAAGCACTAGA
AAACGATCACGGTTTCTTGACAGAATCAGGCGTTTTCACGGAAGACTTTATCGAAAATTGGATTGACTATAAGCTTAACG
AAGCCAAGCAGTTACAGCTACGTCCTCATCCCTATGAGTTTTACCTCTACTACGATGCTTAA

Protein sequence :
MTTPQELLKKIQDEKIQLIDLKFIDTVGTWQHLTLYQNQIDETAFTDGVPFDGSSIRGWKAINESDMTMVLDPNTAWIDP
FMEVPTLSIICSIKDPRTGEPYNRCPRVIAQKAVDYLVASGIGDTVFFGPEAEFFLFDSARFAQTANEGYYFLDSEEGAW
NSGKEGTAEKPNLGYKPRFKEGYFPVAPTDSFQDIRTEMLLTMAELGVPIEKHHHEVATGGQCELGFRFGKLIEAADWLM
TYKYVIKNVAKKHNKTVTFMPKPIFGDNGSGMHCHQSIWKDGQPLFAGDKYAGLSDMALYYIGGLLKHAPALLAITNPST
NSYKRLVPGYEAPVNLAYSEGNRSASIRIPLSGKNPKAKRLEFRCPDATSNPYLAFAAMLCAGIDGIKNKIHPGEPLDKN
IYELSPEELAKVPSTPSSLELALQALENDHGFLTESGVFTEDFIENWIDYKLNEAKQLQLRPHPYEFYLYYDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-97 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Npun_R5387 YP_001868643.1 glutamine synthetase VFG1399 Protein 6e-129 58