Gene Information

Name : Npun_F4214 (Npun_F4214)
Accession : YP_001867532.1
Strain : Nostoc punctiforme PCC 73102
Genome accession: NC_010628
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : 3.1.1.61
Position : 5289026 - 5289778 bp
Length : 753 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ava:Ava_3369 two component transcriptional regulator, winged helix family

DNA sequence :
ATGTATACCACTGAATCGACCAAATACTCTGCCAGAACGGAAATTGGACAAACCAGCCGTATTCTAGTAGTAGAAGATGA
AGAATTAATCCAGGAAATGCTAGCTGTAGCCCTGGAAGAAGAAGGTTACGGGGTGATAACTGCACCCGATGGGCGATCTG
CTATAGAGTATCTCAAAAGTTTTGAAACCAACTCAGGGGAAGTTCCCTTTGATTTGATCATTCTTGATTTGATGCTGCCA
CAAATCAATGGGCTAGATATATGCCGTTTGCTGCGTCATCAAGGAAACCCAGTTCCGATTTTAATGCTCAGTGCTAAGGG
TAGTGAAACTGACCGCGTTCTGGGGTTAGAGGTGGGAGCAGATGACTACCTGACCAAACCTTTTAGTATGCGCGAGTTAG
TGGCTCGTTGCCGCGCTTTACTCCGCCGCCAACGCCTAAGTAATTTACCACAACTACCAGTATTAAAATTCAAAGATGTT
ACTTTGAATCCTCAAGAATGTCGGGTGCTGGTTCGTGGTCAAGAGGTGAGCCTTTCACCTAAAGAGTTCCGCTTGCTGGA
ATTGTTTATGAGTTATGCCCGGAGGGTATGGTCGCGGGAACAATTACTAGATCAGGTTTGGGGGCCAGATTTCGTTGGTG
ATAGTAAAACTGTAGACGTTCATATTCGCTGGTTGCGCGAAAAATTAGAGCAAGACCCCAGTCATCCCGAATATATTGTG
ACTGTACGAGGTTTTGGCTATAGGTTTGGATAA

Protein sequence :
MYTTESTKYSARTEIGQTSRILVVEDEELIQEMLAVALEEEGYGVITAPDGRSAIEYLKSFETNSGEVPFDLIILDLMLP
QINGLDICRLLRHQGNPVPILMLSAKGSETDRVLGLEVGADDYLTKPFSMRELVARCRALLRRQRLSNLPQLPVLKFKDV
TLNPQECRVLVRGQEVSLSPKEFRLLELFMSYARRVWSREQLLDQVWGPDFVGDSKTVDVHIRWLREKLEQDPSHPEYIV
TVRGFGYRFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-30 42
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 9e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Npun_F4214 YP_001867532.1 two component transcriptional regulator NC_002952.2859905.p0 Protein 3e-35 46
Npun_F4214 YP_001867532.1 two component transcriptional regulator NC_007622.3794472.p0 Protein 3e-35 46
Npun_F4214 YP_001867532.1 two component transcriptional regulator NC_007793.3914279.p0 Protein 3e-35 46
Npun_F4214 YP_001867532.1 two component transcriptional regulator NC_003923.1003749.p0 Protein 3e-35 46
Npun_F4214 YP_001867532.1 two component transcriptional regulator NC_002745.1124361.p0 Protein 3e-35 46
Npun_F4214 YP_001867532.1 two component transcriptional regulator NC_009782.5559369.p0 Protein 3e-35 46
Npun_F4214 YP_001867532.1 two component transcriptional regulator NC_002951.3237708.p0 Protein 3e-35 46
Npun_F4214 YP_001867532.1 two component transcriptional regulator NC_012469.1.7685629. Protein 2e-36 46
Npun_F4214 YP_001867532.1 two component transcriptional regulator NC_002758.1121668.p0 Protein 3e-35 46
Npun_F4214 YP_001867532.1 two component transcriptional regulator NC_009641.5332272.p0 Protein 3e-35 46
Npun_F4214 YP_001867532.1 two component transcriptional regulator NC_013450.8614421.p0 Protein 3e-35 46
Npun_F4214 YP_001867532.1 two component transcriptional regulator HE999704.1.gene2815. Protein 7e-40 46
Npun_F4214 YP_001867532.1 two component transcriptional regulator AE016830.1.gene1681. Protein 7e-44 44
Npun_F4214 YP_001867532.1 two component transcriptional regulator FJ349556.1.orf0.gene Protein 3e-34 43
Npun_F4214 YP_001867532.1 two component transcriptional regulator CP001918.1.gene5135. Protein 2e-14 43
Npun_F4214 YP_001867532.1 two component transcriptional regulator NC_010079.5776364.p0 Protein 2e-29 41
Npun_F4214 YP_001867532.1 two component transcriptional regulator NC_002952.2859858.p0 Protein 2e-29 41
Npun_F4214 YP_001867532.1 two component transcriptional regulator NC_007622.3794948.p0 Protein 2e-29 41
Npun_F4214 YP_001867532.1 two component transcriptional regulator NC_003923.1003417.p0 Protein 2e-29 41
Npun_F4214 YP_001867532.1 two component transcriptional regulator NC_013450.8614146.p0 Protein 2e-29 41
Npun_F4214 YP_001867532.1 two component transcriptional regulator NC_002951.3238224.p0 Protein 2e-29 41
Npun_F4214 YP_001867532.1 two component transcriptional regulator NC_007793.3914065.p0 Protein 2e-29 41
Npun_F4214 YP_001867532.1 two component transcriptional regulator NC_002758.1121390.p0 Protein 2e-29 41
Npun_F4214 YP_001867532.1 two component transcriptional regulator BAC0111 Protein 1e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Npun_F4214 YP_001867532.1 two component transcriptional regulator VFG1390 Protein 2e-34 43
Npun_F4214 YP_001867532.1 two component transcriptional regulator VFG1702 Protein 5e-31 42
Npun_F4214 YP_001867532.1 two component transcriptional regulator VFG1389 Protein 9e-22 42
Npun_F4214 YP_001867532.1 two component transcriptional regulator VFG1563 Protein 5e-31 41