Gene Information

Name : Npun_R4017 (Npun_R4017)
Accession : YP_001867339.1
Strain : Nostoc punctiforme PCC 73102
Genome accession: NC_010628
Putative virulence/resistance : Resistance
Product : ATPase P
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : 3.6.3.3
Position : 5045185 - 5047155 bp
Length : 1971 bp
Strand : -
Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: haloacid dehalogenase; E1-E2 ATPase-associated domain protein; KEGG: ana:all3161 cadmium-transportin

DNA sequence :
ATGCTCTACCCCCAACGTTTGGGCCAATTCACCAGAGAACACGCAGATACCGTAGCAGCCCTTTTGTGTGGCTTACTGTT
ATTTCTCGGATGGTTCGCCTTACATCTTGGCGCTTTGGGATTCGCGTTCCTGCTACTACCTGCTGCTTATGTAATTGGTG
GTTACGAAAGTGCGCGGGAAGGATTGACTACCCTCTTCAAAGAAAAAGAACTCGATGTAGATTTGCTGATGATTGTGGCG
GCCATTGGTGCTGCGAGTCTCGGCTTATGGCGACGAGAATATCATCTAATTATTGATGGGGCAATTTTGATTCTGATTTT
TGCTATCAGTGGCGCATTAGAAGGCTATGCAATGGCGCGAACTGAGCGGAGTATCCGCAGTTTGATGAGCCTGACACCAG
ATACAGCAAGAGTTTTGCTTCAGGGAAGAGAAGAAGAAATTCCGATTAGTCAGTTAAAAGTGGGTGATGAGATTGTCGTT
AAACCTGGAGAGCTAATTCCTACCGATGGGATAATTTTATCTGGTTACAGCACCCTCAATCAAGCTGCAATTACAGGCGA
GTCTTTACCTGTAGAGAAAACAGTGGGTGCAGAAGTATTTGCCGGCACACTTAACGGCTATGGTGCATTGCAGATTAAGG
TACACAAACCAGCCCAAAGCAGTTTGATTCAGCGTGTGATTCGCTTGGTAGAACAGGCGCAGACAGAAGCACCTCCTTCG
CAAGAGTTTATCGATCGCTTTGAAAAAGGATATGCCAAAGTCATTGTAGTAGCCGGAACATTACTGGCAACTTTACCGCC
ATTTCTTTGGGGTTGGGATTGGGAAACAACAATTTATCGGGCACTGACTTTCTTAGTGGTGGCTTCTCCCTGTGCGCTGA
TGGCTGCAATTATGCCCACCCTGCTTTCGGGAATCGCCAACGGTGCAAGACAGGGGATTTTGTTTAAAAATGGCGCACAG
TTGGAGAAAATTGGCAAAGTCCGAGCGATCGCATTTGATAAAACTGGTACTCTGACAACAGGGCAGTTGCAGGTATTCCA
GGTAATTTCAGTTAGTGAATACACCCAATCAAATGTATTAAAAGCCGCCGCTAGTGTGGAGTCATATTCAGAACATCCCA
TCGGTAAGGCAATTGTGCAGGCAGCTGGTGAAACAGTTCGAGTCTTGGCGGTTCCCGTCGAGTCGAAACTGTTGAACCCG
AAGGGTGATTTGGACTTGGTTGGTGCAATACAAGTCCAAGCAATACCTGGACAGGGAATTGTCGGAATCGCTCAAGAACA
ACAAATAATTGTGGGCAATGCTGTTTTTGTGCAGCAGTATGTGACAAATTTACCTGAAGAGTTGCGAGAAATAGCTCAAT
CTTTGGAGCAAGAAGGTAAAACTGTGGTTTGGGTAGCGCAAGGAAATATAGCAGAGGTGATGGGTGTAATTGCGATCGCA
GATGAAGTAAGATCGCAAGCAACAGCAACCATTACGCGCTTAAAGCAACTGGGAATTGAGCAAATTGTCATGTTAACTGG
AGATAATGAAGAAACTGCTCAAAGTGTCGCCAAAGCTGTAGGAATCGATCGGGTATATGCTCAACTTCTACCAGAAGATA
AGCTAGATGTTATCCGCCATCTACAGCAAAAGTATCAAACAGTGGCAATGGTGGGCGATGGAATTAATGATGCACCAGCT
TTAGCGCAAGCATCTGTGGGTATAGCGATGGGAATATCTGGTAGCGATGTGGCACTAGAAGCCGCAGATATAGTACTGAT
GGCAGACAAGTTAGAAAAAATTGCTGTAGCGATGCATTTGGGCAGGCGATCGCAATCCATAGTCAAACAGAATATATTCG
TAGCGTTGAGTTTTATTGTGTTGCTTTTGGTGGGCAACTTTCTAGGAAGTATTAACTTACCTATTGGCGTGATTGGGCAT
GAAGGTTCTACAGTATTAGTTACCCTCAGTGGTCTAAGATTGCTGAAATAA

Protein sequence :
MLYPQRLGQFTREHADTVAALLCGLLLFLGWFALHLGALGFAFLLLPAAYVIGGYESAREGLTTLFKEKELDVDLLMIVA
AIGAASLGLWRREYHLIIDGAILILIFAISGALEGYAMARTERSIRSLMSLTPDTARVLLQGREEEIPISQLKVGDEIVV
KPGELIPTDGIILSGYSTLNQAAITGESLPVEKTVGAEVFAGTLNGYGALQIKVHKPAQSSLIQRVIRLVEQAQTEAPPS
QEFIDRFEKGYAKVIVVAGTLLATLPPFLWGWDWETTIYRALTFLVVASPCALMAAIMPTLLSGIANGARQGILFKNGAQ
LEKIGKVRAIAFDKTGTLTTGQLQVFQVISVSEYTQSNVLKAAASVESYSEHPIGKAIVQAAGETVRVLAVPVESKLLNP
KGDLDLVGAIQVQAIPGQGIVGIAQEQQIIVGNAVFVQQYVTNLPEELREIAQSLEQEGKTVVWVAQGNIAEVMGVIAIA
DEVRSQATATITRLKQLGIEQIVMLTGDNEETAQSVAKAVGIDRVYAQLLPEDKLDVIRHLQQKYQTVAMVGDGINDAPA
LAQASVGIAMGISGSDVALEAADIVLMADKLEKIAVAMHLGRRSQSIVKQNIFVALSFIVLLLVGNFLGSINLPIGVIGH
EGSTVLVTLSGLRLLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 2e-100 42
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 2e-100 42
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 6e-102 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Npun_R4017 YP_001867339.1 ATPase P BAC0092 Protein 0.0 68