Gene Information

Name : Npun_F3575 (Npun_F3575)
Accession : YP_001866914.1
Strain : Nostoc punctiforme PCC 73102
Genome accession: NC_010628
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 4499874 - 4502327 bp
Length : 2454 bp
Strand : +
Note : PFAM: UvrB/UvrC protein; ATPase AAA, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA; SMART: AAA ATPase; KEGG: ava:Ava_4348 UvrB/UvrC protein

DNA sequence :
ATGTTTGAACACTTCACTTCCGAAGCCATTAGAGTAATTATGCTAGCTCAGGAAGAAGCACGTCGCCTGGGACACAATTT
CGTAGGAACTGAACAAATTCTCCTGGGTTTGATGGGAGAAGGAACTGGGGTTGCTGCTAAAGTGCTGGCCGAATTAGGCG
TTACCCTCAAAGACGCACGTCGTGAGGTAGAAAAAATTATTGGTAGGGGTTCTGGCTTTGTACCACCAGAAATTCCTTTC
ACTCCCAAGGTGAAAAGCCTCTTCGAGCAATCTTTTAAAGAAGCTCATAGTCTGGGACAGAATTACATCAACACAGAACA
CTTACTCTTAGGATTAACTGAGGCTGGTGAAGGTGTCGCCGCCAAAGTCCTGCAAAATCTAGGAGTTGACTTCAAGAGTG
TCCGTAGTGCCATAGTTCGCCGTTTGGGTGAAAATGCACCAGCTTTCGCTGGTAGTGGTAGTCAAAAGCGCACCCAACCG
CTAACGATGGAAGAATATGGCAGAAATTTGACCAAATTAGCGCAAGAAGGCAGACTCGACCCCGTAGTTGGTCGTGAGAA
GGAAATTGAGCGGGCGATCCAAATTCTCGGTCGCCGGACTAAGAATAATCCCGTGTTGATTGGAGAACCAGGAGTTGGTA
AAACTGCGATCGCAGAAGGTCTAGCTCAAAGAATTATCAACCAAGATGTTCCCGAAACCTTGCAAGACAAGCAAGTTATC
AGCCTCGATATGGGGTCATTGGTAGCTGGGACTCGCTTCCGTGGCGATTTTGAAGAACGCATCAAAAAAGTTGTGGAAGA
AGTTCGCACTGTCGGTAACATAATTTTGGTAATTGACGAAATTCACACCTTGGTTGGCGCTGGTGGTACAGAAGGTGGTT
TGGATGCAGCCAACATCCTCAAACCTGCCTTAGCACGGGGTGAACTCCAGTGCATCGGCGCAACAACCCTTGATGAGTAT
CGGAAGCACATCGAGCGCGATGCCGCACTAGAACGTCGTTTCCAACCAATTATGGTTGGTGAACCCTCAGTAGAAGAAAC
CGTACAAATTCTTTACGGCTTGCGCGGCGCTTACGAACAGCACCACAAAGTCACAATTTTGGATTCGGCACTTGTAGCAG
CCGCAGAATTATCAGACCGCTACATTAGCGATCGCTTCTTGCCAGATAAGGCAATAGACTTGATTGATGAAGCTGGTTCT
CGCGTTCGTCTGCGGAATTCTCAAAGTTCTCCCAATAAAGAACTCAAGCGTGAACTCGCTGGCGTTACCAAAGAAAAAGA
AGCAGCAGTCAGAGTCCAAGATTTTGACAAAGCTGTAACCCTACGCGACCAAGAGTTAAAACTCGCAGAACAACTGCAAG
CAACGTTTACACCAAACGAGCAACCTGTCAACTCTACTGTAGTTGACGAAGAAGACATTGCTCAAATCGTTGCCTCTTGG
ACTGGCGTACCAGTCAACAAACTGACTGAATCTGAATCAGAGTTGCTTCTGCACCTAGAAGACACTCTGCATCAACGCCT
CATCGGTCAAGAGCAAGCTGTCTCGGCTGTATCTCGCGGTATCCGTCGCGCCCGCGTCGGCTTGAAAAATCCCAATCGTC
CCATTGCTAGCTTTATCTTCTCCGGGCCTACCGGAGTCGGTAAAACAGAATTGGCCAAGGCATTAGCTTCCTACTTCTTC
GGTGCGGAAGACTCAATGATTCGGCTAGATATGTCCGAATACATGGAAAGTCATACTGTCGCCAAGCTAATTGGTTCGCC
TCCGGGTTACGTCGGATACGACGAAGGCGGACAACTTACAGAAGCCGTGCGCCGGAAACCTTACACAGTGTTGCTATTCG
ACGAAATCGAAAAAGCACACCCCGATGTATTCAATATGCTGCTGCAAATCTTGGATGACGGTCATCTTACCGATGCCAAA
GGTCGGAAGGTGGACTTCAAGAATACGCTGATCATTTTGACATCTAACATCGGTTCCAAGGTGATTGAAAAAGGTGGTAG
TGGTTTAGGCTTTGACTTCGACACTCAAGCCAACGCTAGTTATAACCGCATCCGCACCTTGGTAAACGAGGAATTGAAAG
CTTACTTCCGTCCTGAGTTCCTGAACCGTCTTGATGAAATTATCGTCTTCACCCAGCTTTCTAGGGATGAAGTGAAGCAA
ATTGCTGAAATTATGCTTCGTGAAGTTTCTAAACGCTTGACAGAAAAGGGAATTACTCTTGAAGTTAGCGATCGCTTCAA
AGAACTTGTAGTGCAAGAAGGCTATAACCCTAGTTATGGTGCTAGACCATTACGTCGGGCAATTATGCGCCTTTTAGAAG
ATTCTCTCGCTGAAGCAATGCTGTCTGGTGAAATTACAGATGGAGACACAGCGCTTATCGATGTTGATGATGACTCTCAG
GTGAGAGTACAAAAATTAGAAAAACGAGAATTGCTCTTGGCAAATGTTGGCTAA

Protein sequence :
MFEHFTSEAIRVIMLAQEEARRLGHNFVGTEQILLGLMGEGTGVAAKVLAELGVTLKDARREVEKIIGRGSGFVPPEIPF
TPKVKSLFEQSFKEAHSLGQNYINTEHLLLGLTEAGEGVAAKVLQNLGVDFKSVRSAIVRRLGENAPAFAGSGSQKRTQP
LTMEEYGRNLTKLAQEGRLDPVVGREKEIERAIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIINQDVPETLQDKQVI
SLDMGSLVAGTRFRGDFEERIKKVVEEVRTVGNIILVIDEIHTLVGAGGTEGGLDAANILKPALARGELQCIGATTLDEY
RKHIERDAALERRFQPIMVGEPSVEETVQILYGLRGAYEQHHKVTILDSALVAAAELSDRYISDRFLPDKAIDLIDEAGS
RVRLRNSQSSPNKELKRELAGVTKEKEAAVRVQDFDKAVTLRDQELKLAEQLQATFTPNEQPVNSTVVDEEDIAQIVASW
TGVPVNKLTESESELLLHLEDTLHQRLIGQEQAVSAVSRGIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKALASYFF
GAEDSMIRLDMSEYMESHTVAKLIGSPPGYVGYDEGGQLTEAVRRKPYTVLLFDEIEKAHPDVFNMLLQILDDGHLTDAK
GRKVDFKNTLIILTSNIGSKVIEKGGSGLGFDFDTQANASYNRIRTLVNEELKAYFRPEFLNRLDEIIVFTQLSRDEVKQ
IAEIMLREVSKRLTEKGITLEVSDRFKELVVQEGYNPSYGARPLRRAIMRLLEDSLAEAMLSGEITDGDTALIDVDDDSQ
VRVQKLEKRELLLANVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Npun_F3575 YP_001866914.1 ATPase VFG0079 Protein 0.0 58
Npun_F3575 YP_001866914.1 ATPase VFG0080 Protein 4e-152 51