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Name : Npun_F2440 (Npun_F2440) Accession : YP_001865944.1 Strain : Nostoc punctiforme PCC 73102 Genome accession: NC_010628 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : 4.2.1.46 Position : 3029358 - 3031316 bp Length : 1959 bp Strand : + Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: dsy:DSY3 DNA sequence : TTGTTAATTTTTGATATCATTATTTTTTCAATCACTCCTTTATTAGCGCTGCTTATCCGTTTAGATGGCTATCTCGAGGT TCAAGCAGACATATCACAACTAGGAATCGCAACTCTATTATTTTTATTAGTAAAACTAATTGTATTTTGGAGTTTCGGTT TTTATAGGCGCTACTGGCGCTATGCCAGTGTTGAGGAACTGACATATATAGCCATGTTGATGGTAGGTGCAATAGTCATC CAAAGCATGACATTTAATCTTCTTAATCACATATTGCCTTTTGTAACAGATAACCTGCCGCGATCGCTGCCATTTATTGA TGGATTATTGTCGTGTATTTTCATAGGAATGCTACGTTTCAGTTTTCGAGTTGTAGAAAGGTTTATCCAACGTCAAGGAG TATTTAATCCACGAGAGCGGGTGCTGATTATTGGTGCTGGTAGTGCCGGAGTTTCCCTTGTGCAAGATATGCAAAGCAAA CCTAAACTAGGCTTTCATGCTGTTGCCTTCATTGACGACGATCCACGGAAATTAAATGTCCAAATTCGTGGTATTCCAGT CGTAGGCGATCGCCACCAAATTCCTGATACTTTGAAATCTCTCCAAATCCACAAAGTTATCATCGCTATGCCTACGGTTG CTGGCCATGTTATTCGAGAAATCGTAGATATTTGCAAAGCAACTGGAATACAAACTAGTACTTTACCTGGAATATATGAA ATCCTCAACGATCGTGTGCGGGTAGATAGCATTCGAGATGTCAGGATTGAGGATTTGCTCAGGCGAGAACCCATACAGAC TGATGTTGAGCAAGTGCATAAATTTATTAAAGGTAAGACAGTACTGATTACAGGTGCAGGAGGATCAATTGGTAGTGAAC TTTGCCGTCAAATTTTCAAATGTCATCCTGCGGAAATGATACTTATGGGACACGGAGAGAATTCTATATTTAATATCCAA CAAGAGTTAGAAAAACTGATCCAAATACTCAAAAATGATGGGAAAGTACAGCGATACACCCCTCGTATTTATACTTTCAT TGGCGATATTCGTTATAGCGTTCGCCTAAAACAAGCTTTTGAACAATTTCAACCTAACGTGATTTTTCATGCGGCTGCTC ATAAGCACGTTCCTCTGATGGAATTAAATTCATCAGAAGCAATCACTAACAATGTGCTTGGAACAAAAAACTTATTGGAT ATGGCGCTGCAATACAATGTTCAAAACTTCGTGATGATTTCCACAGATAAAGCTGTTAATCCCACTAGTGTCATGGGTGC TAGTAAAAGAGTTGCCGAAATGCTAGTGCTGCAAGCTGCAAAAGAAAGCGGTAAACCTTATGTTGTTGTGCGCTTTGGCA ATGTTTTGGGTAGTCGTGGTAGTGTAGTTCCCACTTTTAAAAAACAAATTGCTTCAGGTGGACCAGTCACCGTTACCCAT CCCGATATCTGTCGTTATTTCATGACCATCCCGGAAGCAGTGCAACTTGTTTTACAGGCTGCGGTATTGAGTCGTGGTGG TGAAGTATTAATGCTGAATATGGGCGAACCTGTAAAAATTGTTGACTTGGCGAAGGAATTAATTCGCCTTTCGGGATACG AGGTAAATAAAGATATTGACATCTTATTTACAGGCTTAAGACCTGGGGAAAAGTTATTTGAAGAACTGTTTATTGAGGGA GAAGAGTACGAACCAACTCAACATGAGAAATTGATAGTAGTGAAAAATGGCAGTCGGATTGTTTCAGAAAATCTCACCGT GACTGTAGAAGAATTGTGTACCGCAGCAAGCAAAAGTGATCTTAAATACATCATGTTATTACTGGAACAACTGGTGTCAG GATACAAACCTAATTACTTAGAAGATAATAAACGAATAAATAGTTTAAAGAATAGTGCTGTAATCACATATTCAAATAAA AACAAACTCGCGAAAATGGAATCGGGAGGGGCTAAATAA Protein sequence : MLIFDIIIFSITPLLALLIRLDGYLEVQADISQLGIATLLFLLVKLIVFWSFGFYRRYWRYASVEELTYIAMLMVGAIVI QSMTFNLLNHILPFVTDNLPRSLPFIDGLLSCIFIGMLRFSFRVVERFIQRQGVFNPRERVLIIGAGSAGVSLVQDMQSK PKLGFHAVAFIDDDPRKLNVQIRGIPVVGDRHQIPDTLKSLQIHKVIIAMPTVAGHVIREIVDICKATGIQTSTLPGIYE ILNDRVRVDSIRDVRIEDLLRREPIQTDVEQVHKFIKGKTVLITGAGGSIGSELCRQIFKCHPAEMILMGHGENSIFNIQ QELEKLIQILKNDGKVQRYTPRIYTFIGDIRYSVRLKQAFEQFQPNVIFHAAAHKHVPLMELNSSEAITNNVLGTKNLLD MALQYNVQNFVMISTDKAVNPTSVMGASKRVAEMLVLQAAKESGKPYVVVRFGNVLGSRGSVVPTFKKQIASGGPVTVTH PDICRYFMTIPEAVQLVLQAAVLSRGGEVLMLNMGEPVKIVDLAKELIRLSGYEVNKDIDILFTGLRPGEKLFEELFIEG EEYEPTQHEKLIVVKNGSRIVSENLTVTVEELCTAASKSDLKYIMLLLEQLVSGYKPNYLEDNKRINSLKNSAVITYSNK NKLAKMESGGAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-90 | 47 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-86 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Npun_F2440 | YP_001865944.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 8e-81 | 44 |
