Gene Information

Name : Npun_F1306 (Npun_F1306)
Accession : YP_001864965.1
Strain : Nostoc punctiforme PCC 73102
Genome accession: NC_010628
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : R : General function prediction only
COG ID : COG4221
EC number : 1.1.1.100
Position : 1584931 - 1585665 bp
Length : 735 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: ava:Ava_C0112 NAD-dependent epimerase/dehydratase

DNA sequence :
ATGTTAAACGTAGAAAATAAAGTCATTGCGATCGCTGGAGCCAGTAGCGGTATTGGTGAAGCCACAGCTAAGTTACTCGC
TAAAAATGGTGCAAAAGTCGTTTTAGGGGCACGGCGCACCCAAAAGCTAGAAAAGATTATCGAGGAGATCCGTAACCAGG
GTTATATAGCGGAATTCAAAGCGGTGGATGTTACGAATCGTGAGGATATGAAAGCGTTCATTCACTTCGCCAAAGATAAG
TTTGGTCGTGTCGATGTCATCTTTAACAATGCAGGCGTGATGCCCCTATCGCCGATGAATGCCCTGAAAGTCGAGGAATG
GGACAACATGATTAATGTGAATATCCACGGCGTATTGAATGGTATTGCTGCTGGTTTACCAATCATGGAAGCGCAAGGCA
GTGGACAGTTTATCAATACCGCGTCCATCGCCGCGCACATGGTAGGGCCTACCAGCGCGGTCTATTCCGCGACAAAATTT
GCTGTTTGGGCCATATCCGATGGATTACGTCAAGAATCGAAAAATATTCGCGTGACAATAATATCCCCTGGCGTGGTTGA
GACTGAACTCGGCTCTGATATCACAGATGAATCAGCAACAGGCTTCTTGAAAGAACTTCGGAAAATCGCACTGACCCCAG
ATGCGATCGCTAGAGCCGTCTTATATGCCGTATCCCAACCGGATGATGTTGATATCAATGAAGTGATTGTCCGTCCGACG
GCAAGCGCATTCTAA

Protein sequence :
MLNVENKVIAIAGASSGIGEATAKLLAKNGAKVVLGARRTQKLEKIIEEIRNQGYIAEFKAVDVTNREDMKAFIHFAKDK
FGRVDVIFNNAGVMPLSPMNALKVEEWDNMINVNIHGVLNGIAAGLPIMEAQGSGQFINTASIAAHMVGPTSAVYSATKF
AVWAISDGLRQESKNIRVTIISPGVVETELGSDITDESATGFLKELRKIALTPDAIARAVLYAVSQPDDVDINEVIVRPT
ASAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC20627.1 hypothetical protein Not tested Internalin Protein 1e-43 50
adh CAI59964.1 short-chain dehydrogenase Not tested LIPI-2 Protein 7e-54 49