Gene Information

Name : Bphy_7663 (Bphy_7663)
Accession : YP_001863620.1
Strain :
Genome accession: NC_010627
Putative virulence/resistance : Unknown
Product : integrase catalytic region
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 436891 - 437937 bp
Length : 1047 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: rso:RSp0952 ISRSO3-transposase orfA protein

DNA sequence :
ATGGAAATCGAGATTCTGCGTCGCCAGGGAAACAGCCTCCGGGACATCGCGGTCGAGACCGGCATGGCAGTCAACACGGT
CCGGAAGTATCTGGCATCGGGACCGCCGCAACGCAAGGCCCGTCAACCCGTGGCCGGCAAACTCGCGCCGTTCAAGACAT
ATCTACAGGCACGCGTCGAAGCAGCGAAGCCAGACTGGATTCCGGCGACGGTGCTCAAGCGCGAGATTGAGGAGCGAGGT
TACACGGGAGGATTACGCCGCGTGCAGGACTATCTGCAGAAGCTTCGACCCGCTGCACGCCCCGATCCAGTGGTCCGGTT
CGAGACAGAGCCGGGCCATCAGATGCAGATGGACTGGATCGAGTTTCGCAAGCCGGGGCACAAGCTTGGCATGCTCGCGG
CGTTCGTTGCGACGTTGGGCTACAGCCGCGTCAGCTACGCGGAGTTTGTCACCGACATGCGTATCGAAACGCTGCTGGCG
TGTCACGTACGGGCATTCGAGGCATTTGGCGGCGTCACCAGAGAGATCGTGTACGACAACATGAAGACAGTGATCCTGAA
GCGTGATGCGTACGGCAAGAAACAGCACCGATATCATCCGGGGTTCGCTGACTTCGCCAAACACCATGGGTTCGTGCCTC
GCGTCTGCAAGCCATACCGCGCGAAGACGAAGGGCAAGGTCGAGCGTATGAACGGATATTTGCGCTACAGCTTCTGGGTC
CCGTTGGTTTCGATGCTCAAACAGGCAGGGCTGACAGCGGACTGCGGCCTCTGCAACGAGCGCATCAGGCTGTGGCTGCG
CGACGTCGCCAACGTCCGTGTGCACGGTACGACCAAACGTGTACCTGCCGAAGTGTTGCTCGAAGAGCGGCCACATCTTC
TGCCACTGCCGGCACCATACGTGGGACGTTCGGTTAGAACCGGAGCGACACCGCATCAGCAACCGAAACCGGCGTCGCGG
TACGCGACATCGGAGTGGAATAAGCCGTTGCAGCACCCGTTGTCGGTCTACGATGCATTCAGCCGCACCCAGGAGGTGAA
TGCATGA

Protein sequence :
MEIEILRRQGNSLRDIAVETGMAVNTVRKYLASGPPQRKARQPVAGKLAPFKTYLQARVEAAKPDWIPATVLKREIEERG
YTGGLRRVQDYLQKLRPAARPDPVVRFETEPGHQMQMDWIEFRKPGHKLGMLAAFVATLGYSRVSYAEFVTDMRIETLLA
CHVRAFEAFGGVTREIVYDNMKTVILKRDAYGKKQHRYHPGFADFAKHHGFVPRVCKPYRAKTKGKVERMNGYLRYSFWV
PLVSMLKQAGLTADCGLCNERIRLWLRDVANVRVHGTTKRVPAEVLLEERPHLLPLPAPYVGRSVRTGATPHQQPKPASR
YATSEWNKPLQHPLSVYDAFSRTQEVNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAA21403.1 - Not tested HPI Protein 1e-61 46
unnamed CAB46599.1 IS100 transposase Not tested HPI Protein 7e-62 46
api83 CAF28557.1 transposase Not tested YAPI Protein 7e-62 46
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 Protein 6e-62 46
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 Protein 4e-62 46
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 Protein 4e-62 46
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI Protein 1e-61 46
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 Protein 4e-62 46
y2411 NP_669718.1 transposase Not tested HPI Protein 1e-61 46
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 4e-62 46
YPTB1585 YP_070113.1 transposase Not tested HPI Protein 1e-61 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bphy_7663 YP_001863620.1 integrase catalytic region VFG1461 Protein 3e-62 46
Bphy_7663 YP_001863620.1 integrase catalytic region VFG1514 Protein 2e-62 46
Bphy_7663 YP_001863620.1 integrase catalytic region VFG1626 Protein 2e-62 46
Bphy_7663 YP_001863620.1 integrase catalytic region VFG1607 Protein 2e-62 46