Gene Information

Name : Bphy_6335 (Bphy_6335)
Accession : YP_001862412.1
Strain :
Genome accession: NC_010625
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 908705 - 909376 bp
Length : 672 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pna:Pnap_1535 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCGTATCCTGCTCGTCGAAGACGATCCGTTGCTTGGCGATGGCATTCGCGCTGGCCTTCGGCAAGCGGGGCTTCAGGT
GGACTGGGTTCGCGACGGACACGCTGCCGAAACGGAACTGCGTACCCGGTCCTACGCGGCGGCAGTGCTCGATCTCGGGC
TGCCGCTCAAGGATGGCATCGACGTTCTGTCGTCGGTGCGTCGCGCGGGCGTGACCATGCCTGTACTGGTGCTGACCGCA
CGCGACACTGTGCCCGATCGCGTCCGTGGACTCGACATCGGTGCCGACGATTACGTCGTCAAACCCATTGATCTTCTGGA
ACTCGCCGCCCGTCTACGAGCACTCGTGCGTCGCGCGCACGGCCAGCCACAGGAAAAGCTGGAAGTGCAGGACGTCATAC
TGGAACCGGCGGCAAGGCTTGTCTACCGGAATGGAGAACCCGTCACCGTCTCCACGCGCGAGTTCGACCTGCTCTACGTG
CTGATGCTCAATGCGGGCCGCGTGATGTCGCGCGAACAGCTGGAACAGGCCATGTACGGCTGGGGTCGCGAAGTAGAGAG
CAACACGGTCGAGGTGCACATCCATCGCCTGCGCGCCAAGCTGGGCAGCGACCTGATCAGGACAGTTCGTGGCGTCGGGT
ACGTACTGATGCGAGAGGGTTGCGCGACGTGA

Protein sequence : 
MRILLVEDDPLLGDGIRAGLRQAGLQVDWVRDGHAAETELRTRSYAAAVLDLGLPLKDGIDVLSSVRRAGVTMPVLVLTA
RDTVPDRVRGLDIGADDYVVKPIDLLELAARLRALVRRAHGQPQEKLEVQDVILEPAARLVYRNGEPVTVSTREFDLLYV
LMLNAGRVMSREQLEQAMYGWGREVESNTVEVHIHRLRAKLGSDLIRTVRGVGYVLMREGCAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-33 50
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bphy_6335 YP_001862412.1 two component transcriptional regulator BAC0487 Protein 2e-32 45
Bphy_6335 YP_001862412.1 two component transcriptional regulator BAC0197 Protein 2e-30 44
Bphy_6335 YP_001862412.1 two component transcriptional regulator BAC0083 Protein 3e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bphy_6335 YP_001862412.1 two component transcriptional regulator VFG0473 Protein 5e-37 48
Bphy_6335 YP_001862412.1 two component transcriptional regulator VFG0596 Protein 2e-23 41