Gene Information

Name : Bphy_6112 (Bphy_6112)
Accession : YP_001862215.1
Strain :
Genome accession: NC_010625
Putative virulence/resistance : Virulence
Product : Hcp1 family type VI secretion system effector
Function : -
COG functional category : S : Function unknown
COG ID : COG3157
EC number : -
Position : 663139 - 663624 bp
Length : 486 bp
Strand : -
Note : TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: bur:Bcep18194_B0982 protein of unknown function DUF796

DNA sequence :
ATGGCACAGGATATTTTCCTGAAGATTGATGGCATCGACGGTGAGTCGCAGGACGACAAGCACAAGAACGAGATCGAAGT
ACTGAACTGGAACTGGGAAATCAGCCAGGAATCGTCGATGCATTCGGGCAGCGGCGGCGGCGCCGGCAAGGCGACGGTTG
GCGACCTGTGGTTCCAGCACGGCATCGACCGTGCGAGCCCGAACCTCATGAAGTACGCGCTCACGGGCAAGCACATCGAC
CAGGCTGTGCTCGTCATGCGCAAGGCCGGCGGCAACCCGCTCGAATACCTCAAGATCACGATGAGCGACGTGCTGGTCAC
GCGCGTGAAGCCGTCGGGCAGCAAGAACGGCGAAGAAAAGAGCCTCGAGGAAGTGTCGCTGTCGTTCGCGAAGGTCAAGC
AGGAATACGTCGTCCAGAACGCCCAGGGCGGCAGCGGCGGCGCCGTGACGGCCAGCTACGACATCAAGGGCAACAAGGAG
GCGTAA

Protein sequence :
MAQDIFLKIDGIDGESQDDKHKNEIEVLNWNWEISQESSMHSGSGGGAGKATVGDLWFQHGIDRASPNLMKYALTGKHID
QAVLVMRKAGGNPLEYLKITMSDVLVTRVKPSGSKNGEEKSLEEVSLSFAKVKQEYVVQNAQGGSGGAVTASYDIKGNKE
A

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0302 NP_454882.1 conserved hypothetical protein Not tested SPI-6 Protein 1e-43 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bphy_6112 YP_001862215.1 Hcp1 family type VI secretion system effector VFG2071 Protein 3e-20 48