Gene Information

Name : Bphy_3069 (Bphy_3069)
Accession : YP_001859283.1
Strain :
Genome accession: NC_010622
Putative virulence/resistance : Virulence
Product : lytic transglycosylase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 3447745 - 3448188 bp
Length : 444 bp
Strand : -
Note : PFAM: Lytic transglycosylase catalytic; KEGG: bxe:Bxe_A4502 hypothetical protein

DNA sequence :
ATGAAGCTGACCGCCATCACTTTCGCCGTTGGATTCGCCGCGCTGTTGAGCGCCGGTTCCGCACGCGCCGACTGCTTCGA
CGAGGCGGCCAGCTACCAGAAGGTCAACCCGTTGATTCTCCGCGCCATCGCCTGGCAGGAATCCCACAACCGTCCCGCCG
CAGTCCACAAGAACGCCAACGGTTCGACCGACTATGGCGTCATGCAGATCAACTCCGTTCATCTTCCCGTGCTCGCGCAA
TATGGCATCTCGCAAGGCACGCTGATGGAGCCGTGCAAGAACGTCTACATCGCCGCCTGGCATCTGCGCCAGAAGATGAA
CAAGTACGGCAACACGTGGGCGGCCGTCGGTGCGTACCATTCGGAAACGCCGTCGCTGCGCGACGAGTACGCGCGGCAGA
TCGTCGCCATTCTGCGCAAGTGGAACCTGATGCCCGCCCGATAG

Protein sequence :
MKLTAITFAVGFAALLSAGSARADCFDEAASYQKVNPLILRAIAWQESHNRPAAVHKNANGSTDYGVMQINSVHLPVLAQ
YGISQGTLMEPCKNVYIAAWHLRQKMNKYGNTWAAVGAYHSETPSLRDEYARQIVAILRKWNLMPAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaH AAL78295.1 HpaH precursor Virulence Hrp PAI Protein 8e-37 68
hpaH YP_362172.1 transglycosylase HpaH Virulence Hrp PAI Protein 1e-36 68
XC_3001 YP_244069.1 Hpa2 protein Virulence Hrp PAI Protein 4e-36 65
hpa2 NP_636615.1 Hpa2 protein Virulence Hrp PAI Protein 4e-36 65
hpa2 AAF61278.1 Hpa2 precursor Virulence Hrp PAI Protein 2e-36 65
hpa2 NP_640772.1 Hpa2 protein Virulence Hrp PAI Protein 1e-36 64
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 5e-14 43
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 5e-14 43
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 5e-14 43
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 5e-14 43
unnamed AAC38373.1 rOrf3 Not tested LEE Protein 2e-15 42
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 2e-16 41
unnamed AAK26704.1 unknown Not tested LEE Protein 1e-16 41
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 2e-16 41
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 1e-16 41
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 1e-16 41
unnamed AAL57531.1 unknown Not tested LEE Protein 1e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bphy_3069 YP_001859283.1 lytic transglycosylase VFG0539 Protein 1e-14 43
Bphy_3069 YP_001859283.1 lytic transglycosylase VFG1789 Protein 6e-17 42
Bphy_3069 YP_001859283.1 lytic transglycosylase VFG0719 Protein 7e-16 42