Gene Information

Name : Bphy_2942 (Bphy_2942)
Accession : YP_001859159.1
Strain :
Genome accession: NC_010622
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliQ
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 3297862 - 3298131 bp
Length : 270 bp
Strand : +
Note : TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: bxe:Bxe_A0154 flagellar biosynthesis protein FliQ

DNA sequence : 
ATGACGCCGGAAACCGTCACCACCCTTGCGCACGAAGCGATGTACATCGCGTTGCTGCTGGCCGCGCCGCCGCTGTTCGT
GGGGCTCGTCGTCGGTCTGATCGTGAGCCTGTTCCAGGCCGCGACGCAGATCAACGAAGCGACGCTGTCGTTCATTCCGA
AGCTATTCGCGATTGCCGTGACGCTGGTGCTGATCGGCCCGTGGATGCTTGCGAAGATGCTCGATTACATGCGCCACATG
TTCACGAGCATTCCGACGCTCGCCGGCTGA

Protein sequence : 
MTPETVTTLAHEAMYIALLLAAPPLFVGLVVGLIVSLFQAATQINEATLSFIPKLFAIAVTLVLIGPWMLAKMLDYMRHM
FTSIPTLAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcS AAB06006.1 HrcS Virulence Hrp PAI Protein 1e-11 43
ssaS NP_456108.1 putative type III secretion protein Virulence SPI-2 Protein 9e-06 42
ssaS NP_805091.1 type III secretion protein Virulence SPI-2 Protein 9e-06 42
ssaS YP_216428.1 secretion system apparatus protein SsaS Virulence SPI-2 Protein 7e-06 42
ssaS NP_460385.1 type III secretion system apparatus protein Virulence SPI-2 Protein 7e-06 42
ssaS CAA68200.1 secretion system apparatus, SsaS Virulence SPI-2 Protein 5e-06 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bphy_2942 YP_001859159.1 flagellar biosynthetic protein FliQ VFG2339 Protein 2e-17 69
Bphy_2942 YP_001859159.1 flagellar biosynthetic protein FliQ VFG2495 Protein 1e-17 69
Bphy_2942 YP_001859159.1 flagellar biosynthetic protein FliQ VFG2015 Protein 3e-16 53
Bphy_2942 YP_001859159.1 flagellar biosynthetic protein FliQ VFG1260 Protein 7e-15 44
Bphy_2942 YP_001859159.1 flagellar biosynthetic protein FliQ VFG0520 Protein 2e-06 42