Gene Information

Name : Bphy_1518 (Bphy_1518)
Accession : YP_001857746.1
Strain :
Genome accession: NC_010622
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 1712223 - 1714154 bp
Length : 1932 bp
Strand : +
Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine

DNA sequence :
ATGAACGCCAATCCGAAATTCATTTCCGCGAACGCGCACGTCGACGAGGCCGCCGTCGCGCCGCTGCCGAACTCGCGCAA
GGTCTACGTGACCGGTTCGCAACCCGACATCCGCGTGCCGATGCGTGAAATCACGCAAGCCGACACGCCGACGGGGTTCG
GCGGCGAAAAGAATCCGCCCATCTACGTGTACGACACGTCGGGCCCGTACACCGATCCCGACGCCAAAATCGACATCCGC
GCCGGCCTGCCCGCGCTGCGCCAGCGCTGGATCGAGGCGCGCGGCGACACGGAGTCCCTGCAGGGACTATCGAGCGAATA
CGGCCGCGAGCGCGCCGCCGATCCCGCCACCGCGGAACTGCGCTTTCCCGGCCTGCACCGCACGCCGCGCCGCGCGCAGC
CCGGCAAGAACGTGTCGCAGATGCACTACGCGAAGCAAGGCATCATCACGCCGGAAATGGAATACATCGCGATCCGCGAA
AACCAGCGCCGCGCCGAGTATCTGGAAAGCCTGAAGGCCAGCGGTCCGAACGGCGCGAAGCTCGCCGCGATGATGGGCCG
CCAGCATCCGGGCCAGGCGTTCGGCGCGACAGCATTCGGTCCGAACGGGCTGCAGGAGATCACGCCCGAGTTCGTGCGCG
AAGAAGTCGCGCGCGGCCGCGCAATCATCCCCGCGAACATCAATCACCCGGAAAGCGAGCCGATGATCATCGGCCGCAAC
TTCCTCGTGAAGATCAACGCGAACATCGGCAATTCGGCTGTGACGTCGTCGATCGGCGAGGAAGTCGACAAAATGACGTG
GGCAATCCGCTGGGGCGGCGACACCGTGATGGATCTGTCCACCGGCAAGCACATTCATGAGACGCGCGAATGGATCATCC
GCAATTCGCCTGTTCCCATCGGCACGGTGCCGATCTATCAGGCGCTCGAAAAGGTCAATGGCAAAGCCGAAGACCTGACG
TGGGAGATCTTCCGCGACACGCTGATCGAACAGGCCGAGCAAGGCGTCGACTACTTCACGATTCACGCCGGCGTGCGCCT
GCAATATGTGCCGCTCACCGCGAACCGGATGACGGGCATCGTGTCGCGCGGCGGCTCGATCATGGCGAAGTGGTGCCTTG
CGCATCACAAGGAAAGCTTCCTGTACGAGCACTTCGAAGACATCTGCGAAATCATGAAGGCGTACGACGTGAGCTTCTCG
CTCGGCGACGGCCTGCGCCCCGGCTCGATCTACGACGCGAACGACGAAGCGCAGCTCGGCGAACTGAAGACGCTCGGCGA
ACTCACGCAGATCGCGTGGAAGCACGACGTGCAGGTGATGATCGAAGGCCCCGGCCACGTGCCGATGCAGCTGATCAAGG
AGAACATGGACCTGCAGCTGGAATGGTGCGACGAAGCGCCGTTCTACACGCTCGGACCGCTGACGACGGACATCGCGCCA
GGCTATGACCACATCACGTCGGGCATCGGCGCGGCGATGATCGGCTGGTTCGGCACGGCGATGCTCTGCTACGTGACGCC
GAAGGAACACCTCGGTCTGCCGAACAAGGACGACGTGAAGACGGGCATCATCACGTACAAGCTTGCCGCGCACGCCGCCG
ATCTGGCGAAGGGCCATCCGGGCGCGCAGGTGCGCGACAACGCGCTGTCGAAAGCGCGCTTCGAGTTCCGCTGGGAAGAC
CAGTTCAACCTGGGCCTCGATCCCGACAAGGCGCGCGAATTCCACGACGAAACGCTGCCGAAGGACTCAGCAAAGGTCGC
GCATTTCTGCTCGATGTGCGGCCCGCACTTCTGCTCGATGAAGATCACGCAGGACGTGCGCGACTACGCTGCGAAGGAAG
GCATGAGCGACGCCGACGCGCTGAAGAAAGGGATGGAAGTGAAGGCCGTCGAGTTCATCAAGAGCGGCGCGGAGATCTAT
CAGCGCCAGTGA

Protein sequence :
MNANPKFISANAHVDEAAVAPLPNSRKVYVTGSQPDIRVPMREITQADTPTGFGGEKNPPIYVYDTSGPYTDPDAKIDIR
AGLPALRQRWIEARGDTESLQGLSSEYGRERAADPATAELRFPGLHRTPRRAQPGKNVSQMHYAKQGIITPEMEYIAIRE
NQRRAEYLESLKASGPNGAKLAAMMGRQHPGQAFGATAFGPNGLQEITPEFVREEVARGRAIIPANINHPESEPMIIGRN
FLVKINANIGNSAVTSSIGEEVDKMTWAIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVNGKAEDLT
WEIFRDTLIEQAEQGVDYFTIHAGVRLQYVPLTANRMTGIVSRGGSIMAKWCLAHHKESFLYEHFEDICEIMKAYDVSFS
LGDGLRPGSIYDANDEAQLGELKTLGELTQIAWKHDVQVMIEGPGHVPMQLIKENMDLQLEWCDEAPFYTLGPLTTDIAP
GYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPNKDDVKTGIITYKLAAHAADLAKGHPGAQVRDNALSKARFEFRWED
QFNLGLDPDKAREFHDETLPKDSAKVAHFCSMCGPHFCSMKITQDVRDYAAKEGMSDADALKKGMEVKAVEFIKSGAEIY
QRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 76
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 76
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 74