Gene Information

Name : ldcA (Bphy_1304)
Accession : YP_001857532.1
Strain :
Genome accession: NC_010622
Putative virulence/resistance : Unknown
Product : L,D-carboxypeptidase A
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1619
EC number : 3.4.17.13
Position : 1463094 - 1464020 bp
Length : 927 bp
Strand : -
Note : catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine

DNA sequence :
ATGGCCAGGCATCGCACCATCGAACTGATTGCGCCCTCGGGCTATCCGCACGATCCCAATGCGATTCATCTCGCGCTGAA
GCGTCTGCGTGCGCAAGGGCATCACGTGAAGAACGTCAGCGCGGCGCAGCGTCGCTATCAGCGTTTTGCCGGCACGGACG
GCGAGCGCGCAGCGGAATTGAACCGTTTGGGCGACCCGTCGCGGGAACTGCCCGATATCGTGCTTGCCGTGCGCGGCGGA
TACGGCGCAGTGCGCATCCTGCACGGTCTCGACTACCGCGGCCTGCAACGCCGCCTGCGCGATCAGCCCATCGCGTTCTG
CGGCCACAGCGATTTCACGGCGCTACAACTCGCGCTGCTGTCTCAGGCCGGCGTGACGACGTTTGGCGGCCCCATGCTCG
CAGGCGATTTCGGCGCGGAAAACGTCAGCGACTTCACCATGAAAAACTTCTGGCACGCGCTGACGTCCGAGACTTTCACG
ATTTCCAGCACGACGCCGCAGGCGCAGACCATCGATGTCACGGGCACGCTATGGGGCGGCAACCTGGCCGTGCTCGCGTC
GCTGGTCGGCTCGCCGTATATGCCGCCCGTGGAAGGCGGCATCCTGTTCGTCGAGGACGTGAACGAACAGCCGTTCCGCA
TCGAGCGGCTGATCTATCAGCTGCATCTGGCCGGCATCCTTGAACGCCAGCAGGCGCTCATGCTCGGCGACTTCTCGGGC
GGCAAGCCTTTCGACTACGATAACGGCTACGACTTGTGCGCCATGGTCGAGCAGGTGAGGTCGGTGATCGGCATTCCCAT
CGTGACCGGCCTGCAATTCGGGCACATTCCCGATATGGTGACGCTGCCCGTCGGCGGCGATGCTCGGCTCGTCGGGGGGG
CGCATGGATTCAAACTCACGGTCTCGGGCCATCCTGTGCTCGATTGA

Protein sequence :
MARHRTIELIAPSGYPHDPNAIHLALKRLRAQGHHVKNVSAAQRRYQRFAGTDGERAAELNRLGDPSRELPDIVLAVRGG
YGAVRILHGLDYRGLQRRLRDQPIAFCGHSDFTALQLALLSQAGVTTFGGPMLAGDFGAENVSDFTMKNFWHALTSETFT
ISSTTPQAQTIDVTGTLWGGNLAVLASLVGSPYMPPVEGGILFVEDVNEQPFRIERLIYQLHLAGILERQQALMLGDFSG
GKPFDYDNGYDLCAMVEQVRSVIGIPIVTGLQFGHIPDMVTLPVGGDARLVGGAHGFKLTVSGHPVLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
f304 AAC61707.1 F304 Not tested PAI I CFT073 Protein 5e-71 51