Gene Information

Name : KRH_22030 (KRH_22030)
Accession : YP_001856056.1
Strain : Kocuria rhizophila DC2201
Genome accession: NC_010617
Putative virulence/resistance : Virulence
Product : 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.-
Position : 2531114 - 2532649 bp
Length : 1536 bp
Strand : -
Note : -

DNA sequence :
ATGGCCGCTCTGCAGGACACCAAGCCCGAGAACCTTCCCGATTCCATCCGCCACTACATCAACGGCGAGTGGGTGGACTC
GATCGACGGGGACACGTTCGACGTGCTCAACCCCGTGACCAACGAGCCCTACATCACGGCCGCCTCCGGCAAGAAGGCGG
ACATCGAGGCCGCCGTGGCCGCCGCCAAGAAGGCGTTCGAGGAGGGCCCCTGGCCCAAGATGCTCCCGCGCGAGCGCTCC
CGGATCCTGCACAAGATCGCGGACATCGTGGAGTCCCGCGGTGACCAGCTGGCCGCCATGGAGTCCTACGACTCCGGGCT
GCCCATCACCCAGGCCCTGGGCCAGGCGCGCCGCGCGGCGGAGAACTTCCGCTTCTTCGCGGACCTGATCGTCGCCCAGA
TCGACGACGCCTACAAAGTCCCCGGGCGCCAGGTGAACTACGTGAACCGCAAGCCCATCGGCGTGGCCGGTCTGATCACC
CCGTGGAACACCCCGTTCATGCTCGAGTCCTGGAAGCTGGGCCCCGCCCTGGCCACCGGCAACTGCGTGGTGCTCAAGCC
CGCGGAGTTCACCCCGCTCTCCGCCTCCCTATGGCCGGGGATCTTCGAGGAGGCCGGCGTGCCCGCCGGTGTGTTCAACC
TGGTCAACGGCTTCGGCGAGGAGGGCTACGCCGGTGACTCCCTGGTCAAGCACCCGGACGTGCCCCTGATCTCCTTCACG
GGCGAGTCCCGCACGGGCCAGATCATCTTCGGCAACGCCGCCCCGTACCTCAAGGGCCTGTCCATGGAGCTGGGCGGCAA
GTCCCCGGCCGTGGTCTTCGAGGACGCGGACCTCGAGGCCGCGATCAACGCCACGATTTTCGGGGTGTTCTCCCTCAACG
GCGAACGCTGCACCGCGGGCTCGCGCATCCTGGTGCAGCGCGGGATCTACGACGAGTTCGTGGAGCGCTACGCCGCGCAG
GCCAAGCGGGTGAAGGTGGGTCTGCCCTCGGACCCGTCCACCGAGGTGGGCGCCCTGGTGCACCCGGAGCACTACGAGAA
GGTCATGTCCTACGTGGAGATCGGCAAGCAGGAGGCCCGCCTGGTGGCCGGTGGCGGCCGCCCCGAGGGCTTCGAGACCG
GCAACTACGTGGCGCCCACGGTGTTCGTGGACGTCAAGCCGGACGCCCGGATCTTCCAGGAGGAGATCTTCGGTCCGGTG
GTGGCCATCACCCCGTTCGACACGGAGGAGGAGGCCCTGGAGCTCGCGAACAACACCAAGTACGGCCTGGCGGCCTACAT
CTGGACCAGCGACCTCAAGCGTGCTCACAACTTCGCGCAGAACGTGGAGGCGGGCATGGTGTGGCTGAACTCCAACAACG
TGCGCGACCTGCGCACCCCGTTCGGCGGTGTGAAGGCCTCCGGGCTGGGCCACGAGGGCGGCTACCGCTCGATCGACTTC
TACACGGACCAGCAGGCCGTGCACATCAACCTGGGCGAGGTGCACAACCCGGTGTTCGGCAAGCAGGAGGACGCCGCCGC
CAAGACGGACGGCTGA

Protein sequence :
MAALQDTKPENLPDSIRHYINGEWVDSIDGDTFDVLNPVTNEPYITAASGKKADIEAAVAAAKKAFEEGPWPKMLPRERS
RILHKIADIVESRGDQLAAMESYDSGLPITQALGQARRAAENFRFFADLIVAQIDDAYKVPGRQVNYVNRKPIGVAGLIT
PWNTPFMLESWKLGPALATGNCVVLKPAEFTPLSASLWPGIFEEAGVPAGVFNLVNGFGEEGYAGDSLVKHPDVPLISFT
GESRTGQIIFGNAAPYLKGLSMELGGKSPAVVFEDADLEAAINATIFGVFSLNGERCTAGSRILVQRGIYDEFVERYAAQ
AKRVKVGLPSDPSTEVGALVHPEHYEKVMSYVEIGKQEARLVAGGGRPEGFETGNYVAPTVFVDVKPDARIFQEEIFGPV
VAITPFDTEEEALELANNTKYGLAAYIWTSDLKRAHNFAQNVEAGMVWLNSNNVRDLRTPFGGVKASGLGHEGGYRSIDF
YTDQQAVHINLGEVHNPVFGKQEDAAAKTDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 3e-92 46
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-63 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KRH_22030 YP_001856056.1 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase VFG0082 Protein 1e-63 41