Gene Information

Name : KRH_21770 (KRH_21770)
Accession : YP_001856030.1
Strain : Kocuria rhizophila DC2201
Genome accession: NC_010617
Putative virulence/resistance : Virulence
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2505727 - 2506422 bp
Length : 696 bp
Strand : -
Note : -

DNA sequence : 
ATGGCCGTGAGCGCGGCCCACGTCTCCCGCACGTACGGTGCCGGCGGCACGGCCGTCCAGGCGCTGCGCGACGTGAGCCT
GGAGATCCCCGAGGGCACGTTCGTGGCGGTCATGGGCCCCTCCGGTTCCGGCAAGTCCACGCTGGTGCACTGCCTGGCCG
GTCTGGACACCCCGGACCGCAACCCCGAGACCCGCATCGCGGTGGGCGGCCAGAACATCGCCGGGCTCTCCGACGACCAG
CTGACCCGCTTCCGCCGCGACCACGTGGGCTTCGTGTTCCAGGCGTTCAACCTGGTCCCCACCCTCACCGCCCGCCAGAA
CATCGAGCTGCCGCTCTCGCTCGCGGGCAAGAAGGTGGACGCCGCCCGCCTGGACGCCCTGGCCACCACGCTGCAGATCA
CCAAGCGCCTGGACCACCGTCCGGACGAGATGTCCGGGGGGCAGCAGCAGCGCGTCGCGATCGCGCGCGCCCTGCTCTCC
CAGCCGGACGTCGTGATCGCGGACGAGCCCACGGGCGCGCTCGACTCGGCCACGTCCCAGGAGGTGCTCGCCTTGCTGCG
CCGCTGCGTGGACGAACTGGGCCAGACCGTCGTCGTGGTCACCCACGACGCCACCGTGGCCGAGGCCGCGGACCGCGTGG
TGCGCGTGCGCGACGGTCAGATCGTGGCCGACGACGCCCGGGGAGGTGTGCGCTGA

Protein sequence : 
MAVSAAHVSRTYGAGGTAVQALRDVSLEIPEGTFVAVMGPSGSGKSTLVHCLAGLDTPDRNPETRIAVGGQNIAGLSDDQ
LTRFRRDHVGFVFQAFNLVPTLTARQNIELPLSLAGKKVDAARLDALATTLQITKRLDHRPDEMSGGQQQRVAIARALLS
QPDVVIADEPTGALDSATSQEVLALLRRCVDELGQTVVVVTHDATVAEAADRVVRVRDGQIVADDARGGVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KRH_21770 YP_001856030.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-34 52
KRH_21770 YP_001856030.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-36 48
KRH_21770 YP_001856030.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-36 46
KRH_21770 YP_001856030.1 putative ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 5e-38 44
KRH_21770 YP_001856030.1 putative ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-29 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KRH_21770 YP_001856030.1 putative ABC transporter ATP-binding protein VFG2059 Protein 1e-15 41