Gene Information

Name : metB (KRH_20930)
Accession : YP_001855946.1
Strain : Kocuria rhizophila DC2201
Genome accession: NC_010617
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 2401625 - 2402869 bp
Length : 1245 bp
Strand : +
Note : -

DNA sequence :
ATGACACGCTCCACCGACACCCTGCGCGGCCTCGCCACACGGGCGATCCACGACGGCCAGCACCCCGATCCGACCACGGG
CGCCGTGGTCCCGCCGATCTACCAGACCTCCACGTTCGTGCAGGACGGCGTGAACCAGTTCCGCGAGGGCGGCCACGAGT
ACAGCCGCGGATCCAACCCCACGCGCAACGGCTTCGAGGAGCAGCTGGCCTCGCTCGAGCACGGGACACGCGCGTTCGCG
TTCTCCTCCGGCATGGCCGCGGAGGACGCCCTCCTGCGCGCAGTCCTGCAGCCGGGTGACCACGTGGTGCTCGCCGCGGA
CGTCTACGGCGGCACGTTCCGCCTGGTCGACCGGGTGCTCTCGGGCTGGGGGATCTCGCACAGCATCGTGCCCTCGGCCT
CCGCGGACGACGCCGCCCGCACCGTCCGCCCCGGCAGCACCGCCGTGCTGTGGCTGGAAACCCCGTCCAACCCGCTGCTG
CGGGTGGCGGACATCGCTGCGTGGGCGCGAGTGGCCGACGACGCCGGCGCGCTGCTCGTGGTGGACAACACCTTCGCGAC
CCCCGCCCTCCAGAACCCGCTCGCGCTGGGTGCCCACGCCGTGGCCCACTCCACCACCAAGTACATCGGCGGCCACTCGG
ACGTGCTCGGCGGAGCCGTGGTGGTGGGGGACGCGCACTGGCGCGGCGAGACTCTCGCGGAACGGCTCGCGTTCCAGCAG
TTCGCGTGCGGAGCCGTGGCCGGGCCCTTCGACGCGTTCCTGGCCGCCCGCGGACTCAAGACGTTGCCGCTGCGCATGGA
GCGCCACTGTTCCAACGCTCTGGAGGTCGCGCACTTCCTGCGGTCCCGAGATGACGTGGTGGAGGTCCACTACCCCGGCC
TGGAGGATCACCCGCAGCACGACCTCGCGGCGCAGACCCTGCACGGCGGCTTCGGGGGCATCATCTCCTTCCGGCCCGCC
GGCGGGGTCCGAGCAGCGCACGAGTTCGTGGCCGCCTCAGAGCTCTACAACCTGTCCGTGAGCCTGGGCGGGGTGGAGTC
CCTGGCGTGCGTGCCGCACAGCATGACGCACGCCTCGCGGGTCGGCACCGCGTACGAGGTCCCCGAGGACCTGGTGCGGT
TGTCCGTGGGGTTGGAGAGCATCGACGATCACCTGGCGGATCTGGACCGGGCTCTCGGGGCCGCATCGCGGGTGGGGCGG
GGGGATGTGCCCTCTGCCGGCGGTGCCCGCCAGCAGGCGGCATAG

Protein sequence :
MTRSTDTLRGLATRAIHDGQHPDPTTGAVVPPIYQTSTFVQDGVNQFREGGHEYSRGSNPTRNGFEEQLASLEHGTRAFA
FSSGMAAEDALLRAVLQPGDHVVLAADVYGGTFRLVDRVLSGWGISHSIVPSASADDAARTVRPGSTAVLWLETPSNPLL
RVADIAAWARVADDAGALLVVDNTFATPALQNPLALGAHAVAHSTTKYIGGHSDVLGGAVVVGDAHWRGETLAERLAFQQ
FACGAVAGPFDAFLAARGLKTLPLRMERHCSNALEVAHFLRSRDDVVEVHYPGLEDHPQHDLAAQTLHGGFGGIISFRPA
GGVRAAHEFVAASELYNLSVSLGGVESLACVPHSMTHASRVGTAYEVPEDLVRLSVGLESIDDHLADLDRALGAASRVGR
GDVPSAGGARQQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-63 45
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-64 45
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 4e-44 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metB YP_001855946.1 cystathionine gamma-synthase BAC0207 Protein 1e-57 45