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Name : gabD (KRH_19480) Accession : YP_001855801.1 Strain : Kocuria rhizophila DC2201 Genome accession: NC_010617 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 2238390 - 2239865 bp Length : 1476 bp Strand : + Note : - DNA sequence : ATGAGCATCCACGACAAGGTCTCCGCCGTCCTCGAGGCGACCCCCAAGGGTCTTCTGATCAACGGTGAGTGGCGTGACGC CTCGGACGGCGGCACGTTCGACGTCGAGAACCCCGCGACCGGCGAGATCCTGGCCACGCTCGCCTCGGCCACCGAGGAGG ACTCGCATGCGGCCATGGACGCCGCCGCGAACGCCCAGGAGTCCTGGGCCCGCACGAGCACCCGCGAGCGCTCCGAGATC CTGCGCCGCGCCTTCGACCTGGTCCAGGAGCACAAGGAGGACCTCGCGCTGCTGATGACCCTGGAGATGGGCAAGCCGCT GAAGGAGGCCCGGGGCGAGGTGGTCTACGGCGGGGAGTTCCTGCGCTGGTTCTCCGAGGAGGCCGTGCGCCACTACGGCC GCTACGCGTCCACGCCCGAGGGCAACCTCAAGATGTTCGTGTCCCACAAGCCCGTGGGCCCGTGCCTGCTGATCACCCCG TGGAACTTCCCGCTGGCCATGGCCACCCGCAAGGTGGCACCCGCCGTGGCCGCGGGCTGCACCATGATCCTCAAGCCCGC GCGCCTGACCCCGTTGACCTCCCAGCTCTTCGCCAAGCTCATGATCGAGGCGGGGATCCCCGCGGGCGTGCTGAACGTGG TGTCCTCCAAGTCCGCGTCCAACGTCTCGGATCCGATCATGGCGGACCCGCGCCTGCGCAAGGTGTCCTTCACGGGCTCC ACCCCGGTGGGCAAGCAGCTCATGAAGACCGCCACGGACCACGTGCTGCGCACCTCCATGGAGCTGGGTGGCAACGGCCC GTTCATCGTGTTCGAGGACGCGGACCTGGACAAGGCCGTGGAGGGCGCCATGGCCGCCAAGATGCGCAACATGGGCGAGG CGTGCACCGCCGCCAACCGCTTCCTGGTGCACGAGTCCGTGGCCGAGGAGTTCTCGCAGAAGTTCGCGGCCAAGCTCAAG GCGCTCAAGCCCGGCAACGGCCTGGATGAGGACTCCACCGTGGGCCCCATGGTGGAGAAGAAGGCCCTGGACTCGGTCAA CGAGTTCGTCCAGGACGCACTCGAGAAGGGCGCGAGCGCCGTCGTGGGCGGCAAGCCCGTGGACGGGCCCGGCTACTTCT TCGAGCCCACCCTGCTCACCGGCGTGAGCGAGGAGTGCCGCGTGTTCCAGGAGGAGATCTTCGGTCCCGTGGCGCCCATG ACCACCTTCACGGACGAGGACGACGCCGTGCGCCTGGCCAACATGACCGAGTACGGCCTGGCCTCCTACGTGTTCACCGA GGACATCTCCCGCGCGCTGCGCATCGGCGAGCGCATCGAGTACGGCCTGCTGGGGCTGAACGTGGGCGTGATCTCCAACG CGGCGGCACCGTTCGGCGGTGTGAAGGAGTCCGGCGTGGGCCGCGAGGGCGGCGCCGAGGGCATCGCCGAGTACACCACC GTGCAGTACATGGGCATGCCCTCCCCCTGGGCCTGA Protein sequence : MSIHDKVSAVLEATPKGLLINGEWRDASDGGTFDVENPATGEILATLASATEEDSHAAMDAAANAQESWARTSTRERSEI LRRAFDLVQEHKEDLALLMTLEMGKPLKEARGEVVYGGEFLRWFSEEAVRHYGRYASTPEGNLKMFVSHKPVGPCLLITP WNFPLAMATRKVAPAVAAGCTMILKPARLTPLTSQLFAKLMIEAGIPAGVLNVVSSKSASNVSDPIMADPRLRKVSFTGS TPVGKQLMKTATDHVLRTSMELGGNGPFIVFEDADLDKAVEGAMAAKMRNMGEACTAANRFLVHESVAEEFSQKFAAKLK ALKPGNGLDEDSTVGPMVEKKALDSVNEFVQDALEKGASAVVGGKPVDGPGYFFEPTLLTGVSEECRVFQEEIFGPVAPM TTFTDEDDAVRLANMTEYGLASYVFTEDISRALRIGERIEYGLLGLNVGVISNAAAPFGGVKESGVGREGGAEGIAEYTT VQYMGMPSPWA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-96 | 47 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 4e-104 | 47 |
