Gene Information

Name : KRH_16890 (KRH_16890)
Accession : YP_001855542.1
Strain : Kocuria rhizophila DC2201
Genome accession: NC_010617
Putative virulence/resistance : Virulence
Product : NAD(+)-dependent aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 1915079 - 1916602 bp
Length : 1524 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGTGTACACACAGCCCGGCAATGACGGCTCGGTCGTCACCTTCAAGCCCCGCTACGAGCACTTCATCGGAGGCCA
GTGGGTGGCGCCGGTCAAGGGTCAGTACTTCGAGGACGTCACCCCGGTCACGGGCCAGGCGTTCACAGAGGTCGGGCGCG
GAACCGCGGAGGACATCGAGGCCGCGCTGGACGCGGCCTGGGCCGCCGCACCGTCGTGGAACGCCTCCACGCCCACGCAG
CGCGCGATCATGCTCAACAGGATCGCGGACCGCATGGAGGAGAACCTCGAGGTGATCGCCGTCGCCGAGACCTGGGACAA
CGGCAAGCCGGTCCGCGAGACCCTCAACGCGGACATCCCCCTGGCCATCGACCACTTCCGATACTTCGCCGGTGCGATCC
GCGCGCAGGAAGGGCGGCTGTCCCAGCTGGACGAGGACACCGTGGCGTACCACTTCCATGAGCCCCTCGGTGTCGTCGGC
CAGATCATCCCCTGGAACTTCCCCATCCTTATGGCCGTGTGGAAGCTCGCCCCGGCGCTGGCCGCCGGCAACTGCGTGGT
GCTCAAGCCCGCCGAGCAGACTCCCGCCTCGATCCTCGTGCTGATGGAGCTGATCCAGGACCTCGTCCCGGACGGCGTGG
TGAACATCGTCAACGGCTTCGGCGTCGAGTGCGGCAAGCCGCTCGCGTCCAACAAGCGCATCCGCAAGATCGCGTTCACC
GGTGAGACCACCACGGGCCGACTCATCATGCAGTACGCGTCCGAGAACATCATCCCGGTCACCCTGGAACTCGGGGGCAA
GTCGCCCAACATCTTCTTCGAGGACGTCGCCCAGCAGAAGGACGGCTTCTACGACAAGGCCCTGGAAGGCTTCGCGTTCT
TCGCTCTGAACCAGGGTGAGATCTGCACGTGCCCGTCGCGAGCGCTGATCCAGGAATCGATGTACGACCAGTTCCTCGCG
GACGGGGTCGACCGCGTCTCTCGCATCACCGCCGGCAACCCGCTCGACACCGACACCATGATCGGCGCGCAGGCCTCCAC
GGACCAGCTCGAGAAGATCCTGTCCTACCTGGACATCGGCAAGAAGGAGGGAGCGAAGGTGCTCATCGGCGGCGAGCGCG
CTGAGCTCGAGGGCGACCTCGCGGGCGGCTACTACGTGCAGCCCACCGTGTTCGAGGGCACCAACGACATGCGCATCTTC
CAGGAGGAGATCTTCGGTCCGGTGCTCTCGGTAGCGAAGTTCGGCTCGTACGACGACGCTATCTCGATCGCCAACGACAC
CCTCTACGGTCTGGGCGCCGGTGTGTGGGCTCGTAGCGGCAACACCGCCTACCGCGCCGGCAGGGCCATCCAGTCCGGGC
GCGTGTGGGTGAACCAGTACCACAGCTACCCCGCGCACTCCGCGTTCGGCGGCTACAAGTCCTCGGGCATTGGCAGGGAG
AACCACCTCATGATGCTCGACCACTACCAGCAGACCAAGAACATGCTCGTGAGCTACACCGAGAACGCGCAGGGCTTCTT
CTAG

Protein sequence :
MSVYTQPGNDGSVVTFKPRYEHFIGGQWVAPVKGQYFEDVTPVTGQAFTEVGRGTAEDIEAALDAAWAAAPSWNASTPTQ
RAIMLNRIADRMEENLEVIAVAETWDNGKPVRETLNADIPLAIDHFRYFAGAIRAQEGRLSQLDEDTVAYHFHEPLGVVG
QIIPWNFPILMAVWKLAPALAAGNCVVLKPAEQTPASILVLMELIQDLVPDGVVNIVNGFGVECGKPLASNKRIRKIAFT
GETTTGRLIMQYASENIIPVTLELGGKSPNIFFEDVAQQKDGFYDKALEGFAFFALNQGEICTCPSRALIQESMYDQFLA
DGVDRVSRITAGNPLDTDTMIGAQASTDQLEKILSYLDIGKKEGAKVLIGGERAELEGDLAGGYYVQPTVFEGTNDMRIF
QEEIFGPVLSVAKFGSYDDAISIANDTLYGLGAGVWARSGNTAYRAGRAIQSGRVWVNQYHSYPAHSAFGGYKSSGIGRE
NHLMMLDHYQQTKNMLVSYTENAQGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-135 59
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 7e-144 58
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 7e-144 58
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 7e-144 58
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-143 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KRH_16890 YP_001855542.1 NAD(+)-dependent aldehyde dehydrogenase VFG0082 Protein 1e-135 59