Gene Information

Name : xerD (KRH_15340)
Accession : YP_001855387.1
Strain : Kocuria rhizophila DC2201
Genome accession: NC_010617
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1735689 - 1736603 bp
Length : 915 bp
Strand : -
Note : -

DNA sequence :
GTGGCGCGATACCTGGACCACCTCGTGGTCGAGCGCGGACTCGCCGCGAACACCGTGAGCGCGTACCGCCGGGACCTCGC
GCGCTACCTGCAGCACCTCACGGCGACCGCCGCGCACGTGCGCGTGCCCAGGGACATCACGGCCGATCACGTGCGGGCGT
TCGTGCGGCGCATCCGCGAGGGCGACGCCGCCCACCCGGCCCTGTCCGCGCGCAGCAGTGCGCGGGTGCTCGCGGCGGTG
CGGGGGGCCCACGCGTTCTGGGTCACGGAGTCGAGCGTGGACACGGACGTCGCGTCCCGCGTGAGCCCGCCCATGCCGCC
GCAGCGGCTGCCCAAGGCCATCGGCGTCACGGAGGTCGAGAACCTCCTGGCCGCCCCGGACCCGGACACACCCGCGGGAC
TGCGGGCCCGGGCGTTCCTCGAACTGCTGTATGCCACGGGTGCGCGTATCTCCGAGGCCGTCGCGCTGGACGTGGACGAC
CTCGCCGGTCTGCACGATGAGGACCTCGCCCTGATCCGTGTGACGGGCAAGGGCGCCAAGCAACGGCTCGTGCCCGTGGG
ATCGTTCGCCGTGGCGGCCCTGGACCGCTACCTTATCCGGGCCCGCCCCGAGTTGGCGCGGCACGGTCGGGGGAGCCCGG
CGGTGTTCCTCAATGCTCGCGGCACGCGGATCTCGCGGCAGACGGCGTGGAACATGGTCAAGGACGCCGCGCGCACGATC
CACCAGGAGGAGCGGATCACGCCGCACACTCTGCGCCACTCGTTCGCCACGCACCTGCTCGAGGGCGGCGCGGACCTGCG
GGTCGTGCAGGAACTGCTGGGTCACGCCTCCCTGGCCACGACCCAGATCTACACGCGCGTGTCCGTGGAGTCCCTGCGCG
AGGTCTACGCGACGTCCCACCCGCGAGCGCGCTGA

Protein sequence :
MARYLDHLVVERGLAANTVSAYRRDLARYLQHLTATAAHVRVPRDITADHVRAFVRRIREGDAAHPALSARSSARVLAAV
RGAHAFWVTESSVDTDVASRVSPPMPPQRLPKAIGVTEVENLLAAPDPDTPAGLRARAFLELLYATGARISEAVALDVDD
LAGLHDEDLALIRVTGKGAKQRLVPVGSFAVAALDRYLIRARPELARHGRGSPAVFLNARGTRISRQTAWNMVKDAARTI
HQEERITPHTLRHSFATHLLEGGADLRVVQELLGHASLATTQIYTRVSVESLREVYATSHPRAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-37 42
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-37 42