Gene Information

Name : mntB (KRH_01280)
Accession : YP_001853981.1
Strain : Kocuria rhizophila DC2201
Genome accession: NC_010617
Putative virulence/resistance : Virulence
Product : putative manganese ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 135835 - 136704 bp
Length : 870 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCGCCCTGGAGCTGTTCACCCAGCCACTGGAGTACGAGTTCATGCTGCGCGCGCTGGTCACCACCGTGGCGGCGGC
GTCCGTGTGCGCGGTGCTCTCGTGCTGGCTGGTGCTCGTGGGGTGGTCGCTCATGGGCGACGCCGTGTCCCACGCGGTGC
TGCCCGGCGTGGTGCTCGCCTACATCCTGGGTATCCCGTTCACCGTGGGGGCGCTGGTCGCGGGCGTGCTGGCCGTGGTG
CTGATCGGCGGGCTGCGGGGGACCAGCAGGGTCAAGGAGGACGCGTCCATCGGGATCGTGTTCACGTCCCTGTTCGCGCT
GGGCCTGGTGCTCATCTCGGTCACCCCCAGCCAGACGAACCTGACCCACATCATCTTCGGCAACGTGCTGGGCATCTCCG
CAGCGGAGCAGCTGCAGATCTGCGCGCTGGCAGTGGTGGCGCTGGCGGTGATGGTGCTCAAGCGGCGGGACCTCACCCTC
TACGCGTTCGACCCCCAGCACGCCCACGCGATCGGGCTCTCCCCCAGGTTCCTGGGCGGGCTGCTGCTGGGGCTGCTCGC
GGTCACCTCGGTGGCCGCCCTGCAGGTGGTGGGAGTGGTGCTCGTGGTGGCCATGCTCATCATCCCGGGCGCCACCGCGC
ACCTGCTCACCGACCGGTTCGGGGCCATGCTGGTGATCGCGCCGTGCGTCTCGGCCACGTCCGCGGTGCTGGGCATCTAC
CTCAGCTACTGGCTCAACGCCTCCCCCGGCGGGCTGGTAGTGCTCGTCCACGCCGCTGCCTTCGCGCTCGCGTACCTGCT
CAGCCCCGCGCACGGGGTGCTGGGCAGCAGACTGGCGGCACGACGTCGCCGGCGGGCGGTGGCGGGGTAG

Protein sequence : 
MSALELFTQPLEYEFMLRALVTTVAAASVCAVLSCWLVLVGWSLMGDAVSHAVLPGVVLAYILGIPFTVGALVAGVLAVV
LIGGLRGTSRVKEDASIGIVFTSLFALGLVLISVTPSQTNLTHIIFGNVLGISAAEQLQICALAVVALAVMVLKRRDLTL
YAFDPQHAHAIGLSPRFLGGLLLGLLAVTSVAALQVVGVVLVVAMLIIPGATAHLLTDRFGAMLVIAPCVSATSAVLGIY
LSYWLNASPGGLVVLVHAAAFALAYLLSPAHGVLGSRLAARRRRRAVAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 4e-29 46
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-29 46
sitD NP_461785.1 permease Virulence SPI-1 Protein 5e-29 46
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 5e-29 46
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 5e-29 46
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 7e-26 44
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 7e-26 44
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 8e-26 44
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 6e-26 44
sitC NP_461784.1 permease Virulence SPI-1 Protein 8e-26 44
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 6e-21 43
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 4e-21 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mntB YP_001853981.1 putative manganese ABC transporter permease BAC0442 Protein 1e-29 53
mntB YP_001853981.1 putative manganese ABC transporter permease BAC0352 Protein 2e-29 46
mntB YP_001853981.1 putative manganese ABC transporter permease BAC0441 Protein 4e-28 45
mntB YP_001853981.1 putative manganese ABC transporter permease BAC0351 Protein 4e-26 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mntB YP_001853981.1 putative manganese ABC transporter permease VFG0528 Protein 2e-29 46
mntB YP_001853981.1 putative manganese ABC transporter permease VFG0527 Protein 3e-26 44