Gene Information

Name : KRH_11190 (KRH_11190)
Accession : YP_001854972.1
Strain : Kocuria rhizophila DC2201
Genome accession: NC_010617
Putative virulence/resistance : Virulence
Product : iron compound ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1231895 - 1232833 bp
Length : 939 bp
Strand : +
Note : -

DNA sequence : 
GTGGCCGTGCGCGGACTGCGGGCCGGCTACGGGGGCGCGCCCGTGCTCACGGACGTGGACGTCACGTTCCCCGCGGGGCG
CGTCACGGCGCTCGTGGGCGCCAACGGCTGCGGCAAGTCCACGCTGCTCCGCACGTGCGCGCGCCAGCTGACACCCACCG
CCGGCGAGGTGCTCGTGGGCGGGGAGGACGTCCGCGGCTGGCGCCGCACCCGTTTTGCGCAGACGGTGGGCTTCCTGCCG
CAGGACCCCGTGGCGCCGGAGGGGGTGAGCGTGCGGGAGCTGGTCTCGCGCGGTCGCCACCCGCACCGCGGTGCCTTCGG
GCGCTGGCGCGCGGAGGACGACGCCGCCGTGGCCGAGGCGCTCGAGCTCACCGGTCTGTGCGATCTCATGGACCGCCACG
TGACGGACCTCTCCGGGGGGCAGCGCCAGCGCGTGTGGATCGCCCTGGCCCTGGCTCAGCAGACCGACGTGCTGCTGCTG
GACGAGCCCACCACCTATCTGGACATCGCCCGGCAGGTGGAGATCCTGGACATCCTGTGCGAGCTGCAGCGTGCCCGGGG
GATCACCCTGGTGATGGTGCTGCACGAGCTGTCCCTGGCCGCGCGCTACGCGGACGTGCTCGTGGCCATGAAGGCCGGCG
AGGTGGTGGCCCGCGGCGGGGCGGAGGAGGTCATGACCGACGAGGTGGTCGGTCGCGTGTTCGACATGGCCGCCCGCGTG
CTGCACGATCCCGTGACCGACGCCCGCGTGGTGATCCCGCTGTCCTCGGACCGGTCGCGAGCCACGGGGATGGCGGGGGC
CGAGACCCCGGCGGATGCCACGGCAAGAACGGCGGGTCGGACGACGACCGGACCCACGTCCGGGTCACGGACCGGGACGG
CCCGGCCGCACCCGGCCGCACGGGACGAGAACGAGGAGAACGGGGAGGTGCCCGCATGA

Protein sequence : 
MAVRGLRAGYGGAPVLTDVDVTFPAGRVTALVGANGCGKSTLLRTCARQLTPTAGEVLVGGEDVRGWRRTRFAQTVGFLP
QDPVAPEGVSVRELVSRGRHPHRGAFGRWRAEDDAAVAEALELTGLCDLMDRHVTDLSGGQRQRVWIALALAQQTDVLLL
DEPTTYLDIARQVEILDILCELQRARGITLVMVLHELSLAARYADVLVAMKAGEVVARGGAEEVMTDEVVGRVFDMAARV
LHDPVTDARVVIPLSSDRSRATGMAGAETPADATARTAGRTTTGPTSGSRTGTARPHPAARDENEENGEVPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 8e-44 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-46 46
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-46 46
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-51 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-46 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-46 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-51 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-50 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-50 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-50 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-50 43
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-54 41
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-54 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KRH_11190 YP_001854972.1 iron compound ABC transporter ATP-binding protein BAC0164 Protein 5e-44 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KRH_11190 YP_001854972.1 iron compound ABC transporter ATP-binding protein VFG1042 Protein 5e-44 47
KRH_11190 YP_001854972.1 iron compound ABC transporter ATP-binding protein VFG0925 Protein 4e-55 46