Gene Information

Name : kdpE (MMAR_0635)
Accession : YP_001848951.1
Strain : Mycobacterium marinum M
Genome accession: NC_010612
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein KdpE
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 750081 - 750761 bp
Length : 681 bp
Strand : +
Note : receiver domain of the two-component regulatory system Kdp/KdpE involved in the regulation of the Kdp operon

DNA sequence :
ATGACGCGCGTTCTGGTTATCGACGACGAGCCACAGATCCTGCGTGCCCTGCGCATCAACTTCTCCGTGCGCGGCTACGA
CGTGGTGACGGCCGCCACCGGAGCGGCGGCCCTGCGCGCGGCGGCCGAGCAACGACCCGACGTGGTGATTCTGGACCTCG
GCCTGCCCGACATGTCCGGCATCGAAGTGCTCGCCGGCCTGCGCGGCTGGTTCAGCGCACCGGTGATCGTGCTGTCGGCG
CGAAGCGATTCGTCGGACAAGGTGCAGGCCCTCGATGCCGGCGCCGACGACTATGTGACCAAGCCGTTCGGCATGGACGA
GCTGCTGGCCCGGCTCAGGGCCGCCGTGCGCCGGGCCGCGACGGCCACCGACACCGATCAGCCGGTCATCGAAACCAGCT
CATTCACAGTGGATTTGGCGACCAAGAAGGTGATCAAGAACGGGTCGGAGGTTCATCTCACACCCACCGAGTGGGGCATG
CTGGAGATGCTGGTGCGCAACCGCGGCAAGCTGGTCGGGCGCGAAGAGCTGCTCAAGGAGGTTTGGGGCCCGGCCTACGC
CAAGGAAACCCACTACCTGCGTGTCTATCTCGCCCAGCTGCGCCGCAAGCTTGAGGACGACCCCGCACACCCACGCCACC
TACTGACCGAAGCCGGCATGGGCTACCGCTTCGACGGCTGA

Protein sequence :
MTRVLVIDDEPQILRALRINFSVRGYDVVTAATGAAALRAAAEQRPDVVILDLGLPDMSGIEVLAGLRGWFSAPVIVLSA
RSDSSDKVQALDAGADDYVTKPFGMDELLARLRAAVRRAATATDTDQPVIETSSFTVDLATKKVIKNGSEVHLTPTEWGM
LEMLVRNRGKLVGREELLKEVWGPAYAKETHYLRVYLAQLRRKLEDDPAHPRHLLTEAGMGYRFDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 3e-31 42
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 2e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE YP_001848951.1 transcriptional regulatory protein KdpE VFG1390 Protein 3e-25 41