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Name : clpC1 (MMAR_5100) Accession : YP_001853359.1 Strain : Mycobacterium marinum M Genome accession: NC_010612 Putative virulence/resistance : Virulence Product : ATP-dependent protease ATP-binding subunit ClpC1 Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 6178578 - 6181124 bp Length : 2547 bp Strand : - Note : hydrolyses proteins in presence of ATP. may interact with a ClpP-like protease involved in degradation of denatured proteins DNA sequence : ATGTTCGAACGTTTTACCGACCGTGCCCGCCGGGTCGTTGTCCTGGCGCAAGAAGAGGCCCGGATGCTGAACCACAACTA CATCGGCACCGAGCACATTCTGCTGGGGCTAATCCATGAAGGCGAAGGCGTTGCGGCCAAGTCGCTGGAGTCGCTCGGGA TCTCGCTGGAAGGTGTGCGCAGCCAGGTCGAAGAGATCATCGGCCAGGGCCAGCAGGCACCGTCCGGGCACATCCCGTTC ACTCCGCGCGCCAAGAAGGTGCTCGAACTCAGCCTGCGCGAGGCGCTGCAGCTCGGCCACAACTACATCGGTACCGAGCA CATCCTGCTCGGCCTGATTCGCGAGGGCGAGGGTGTGGCCGCCCAGGTGCTGGTCAAGCTGGGCGCCGAACTGACCCGGG TGCGCCAGCAGGTGATCCAGCTGCTGAGCGGCTACCAGGGCAAGGAGGCCGCCGAGGCAGGCACCGGCGGCCGGGGAGGG GAGTCCGGCTCTCCCTCCACGTCGCTGGTTCTCGACCAGTTCGGCCGCAACCTGACCGCGGCTGCCATGGAAGGCAAGCT GGACCCGGTCATCGGCCGCGAGAAGGAAATCGAGCGGGTCATGCAGGTGCTCTCCCGGCGCACCAAGAACAACCCGGTGC TCATCGGTGAGCCCGGCGTGGGCAAGACCGCTGTGGTCGAGGGCCTGGCGCAGGCCATCGTGCACGGCGAGGTGCCCGAG ACGCTGAAGGACAAGCAGCTCTACACGCTGGACCTCGGCTCGCTGGTCGCGGGTTCGCGCTACCGCGGTGACTTCGAGGA ACGCCTGAAGAAGGTGCTCAAGGAGATCAATACCCGCGGCGACATCATCCTGTTCATCGACGAGCTGCACACGCTGGTCG GGGCGGGTGCCGCCGAGGGCGCGATCGATGCCGCAAGCATCCTCAAGCCCAAGCTGGCTCGCGGCGAGCTGCAGACGATC GGTGCCACCACCCTCGACGAGTACCGCAAGTACATCGAGAAGGACGCCGCGCTGGAGCGCCGTTTCCAGCCGGTGCAGGT GGGGGAGCCGACGGTCGAGCACACCATCGAGATCCTCAAGGGCCTGCGGGACCGCTACGAGGCGCACCACCGCGTGTCGA TCACCGATTCCGCGATGGTGGCCGCCGCGACGCTGGCCGACCGCTACATCAACGACCGGTTCCTGCCGGACAAGGCGATC GACCTGATCGACGAGGCGGGCGCCCGGATGCGGATCCGTCGCATGACCGCGCCGCCAGACCTGCGCGAGTTCGACGAGAA GATCGCCGACGCGCGCCGGGAGAAGGAATCGGCGATCGACGCCCAGGACTTCGAGAAGGCGGCGAGCCTGCGCGACCGGG AGAAGCAACTGGTGGCGCAGCGTGCCGAGCGTGAAAAGCAATGGCGTTCGGGCGATCTCGACGTGGTCGCCGAAGTCGAT GACGAACAGATCGCCGAAGTGCTGGGCAACTGGACTGGCATCCCGGTGTTCAAGCTCACCGAGGCGGAAACCACCCGCCT GCTGCGGATGGAAGATGAGCTGCACAAGCGGATCATCGGCCAGGAAGACGCGGTCAAGGCGGTCTCCAAGGCGATCCGCC GCACCCGCGCCGGGCTGAAGGACCCGAAGCGCCCGTCGGGATCGTTCATCTTCGCCGGCCCTTCCGGTGTCGGTAAGACC GAGCTGTCCAAGGCGCTGGCCAACTTCTTGTTCGGTGACGACGACGCGCTCATCCAGATCGACATGGGCGAGTTCCACGA CCGGTTCACCGCGTCCCGGCTCTTCGGTGCTCCGCCCGGATATGTCGGCTACGAAGAGGGCGGCCAGCTCACCGAGAAGG TGCGGCGCAAGCCGTTCAGCGTGGTGCTCTTCGATGAGATCGAGAAGGCACACCAGGAGATCTACAACAGTCTGTTGCAG GTCCTCGAGGACGGCCGGCTCACCGACGGCCAGGGCCGCACGGTCGACTTCAAGAACACCGTGCTGATCTTCACGTCGAA TCTGGGGACATCCGATATTTCCAAGCCCGTCGGCCTCGGGTTCAGCCAGACTGGCGGCGAGAACGACTACGAGCGGATGA AGCAGAAGGTCAACGACGAGCTCAAGAAGCACTTCCGGCCGGAGTTCCTCAACCGCATCGACGACATCATCGTCTTCCAC CAGCTGACTCGCGACGAGATCATCCGGATGGTCGACCTGATGATCGGCCGCGTCGCCAACCAGCTCAAGAGCAAGGACAT GGCGCTCGAGCTGACCGACAAGGCAAAGTCGCTGCTGGCCAAGCGCGGTTTCGACCCGGTCTTGGGTGCTCGTCCGCTGC GGCGAACCATTCAGCGTGAGATCGAGGACCAGCTCTCGGAGAAGATCCTCTTCGAGGAGGTCGGTCCGGGACAGGTCGTC ACCGTCGACGTCGACAACTGGGACGGCGAGGGCGCCGGTGAGGACGCGAAATTTACGTTCACCGGTACCCGCAAGCCGCC GAGTGAGCCGGACCTGGCAAAGGCCGGAGCACACAGCGCCGGGGGACCTGGGCCCACCGAGCAGTAA Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGG ESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTI GATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSAMVAAATLADRYINDRFLPDKAI DLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAASLRDREKQLVAQRAEREKQWRSGDLDVVAEVD DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKT ELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQ VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKPVGLGFSQTGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH QLTRDEIIRMVDLMIGRVANQLKSKDMALELTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVV TVDVDNWDGEGAGEDAKFTFTGTRKPPSEPDLAKAGAHSAGGPGPTEQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 81 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC1 | YP_001853359.1 | ATP-dependent protease ATP-binding subunit ClpC1 | VFG0079 | Protein | 0.0 | 60 |
| clpC1 | YP_001853359.1 | ATP-dependent protease ATP-binding subunit ClpC1 | VFG0080 | Protein | 1e-148 | 51 |
