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Name : lysS (ACICU_00959) Accession : YP_001845618.1 Strain : Acinetobacter baumannii ACICU Genome accession: NC_010611 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 1069805 - 1071367 bp Length : 1563 bp Strand : + Note : class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA DNA sequence : ATGCCACTTCATTTTTACTTAACCGAGGCAGAGATGACGCAACAAAACGCTCAATCGACTTCTGAACCAACTATTTCCGA AAACGATTTAATTGCACAGCGTCATGCCAAATTAAAGCAAATCCAAGATGTTGCAAAGGAAACTGGAAAGAGTCCTTGGC CAAATACATTCAAACGTGAACATTACGCTGCTGATTTACAAGAACAATTTAAAGATCAGTCTAAAGAACAAATCGAAAGC GCTGAACATGTTTATGTAAAAGTTGCTGGCCGTGTCATGTTAAACCGTGGTTCTTTCATGGTGATTCAAGACATGACTGG TCGTATCCAATTATATGTTGACCGTAAAGGTTTACCAAAAGATACGCTTGAAACTATTAAAGGTTTAGACCTTGGCGATA TTATTGCTGCTGAAGGTTATATCGGTCGTTCTGGCAAAGGTGACTTATATGTACACCTTGAAGGTTTTGAACTTCTTACA AAATCGCTTCGTCCATTGCCGGATAAATTTCATGGTTTGAACGACACAGAAGTTAAATATCGTAAGCGTTATCTTGACTT AATTGTGAATGAAGAAACGCGTAAGACTTTTGAAATTCGTGCCAAAGTCGTTGCAGGTATTCGCGCATTTTTAACCAATG AACGTTTCATGGAAGTTGAAACGCCAATGATGCATGTGATTCCGGGTGGTGCGTCTGCACGTCCGTTTGAGACGCATCAT AATGCTTTAGATATGCCATTATTCTTACGTATCGCACCAGAGCTTTATTTAAAACGTTTAGTTGTTGGTGGTTTTGAGCG TGTGTTTGAAATTAACCGTAACTTCCGTAATGAAGGGGTATCAACACGTCATAACCCTGAATTTACCATGATCGAGTTTT ATCAGGCATATGCTGATTATAAAGACTTGATGGCTTTGACTGAAAACATGCTTGAAAAGCTAGCAATTGATATTTTAGGT ACGACTGATGTGCCTTACCAAGGCGAAGTGTTTAGCTTTAAAGGGCCATTCAAGAAAATCTCTATGTTTGATGCGATTTT GGAGAATAATCCGCAGTTCACACCTGAAAATGTAGGCGATCGTGAATTCCTTGCAAAATTTGTTCGTGAGGAATTAAAAG AAGAAGTTAAACCTGGTTTTGGTTTAGGTAAGCTTCAAACAATCGTATTTGAAGAAACGGTTGAGACTAAACTTCGTCAG CCTACTTTTATTACTGAGTACCCAGCAGAGACTTCTCCACTTGCTCGCCGTAATGATGATAATCCGCACATTACTGATCG TTTTGAGTTCTTTATTGGTGGCCGTGAATTGGCAAACGGCTTTAGTGAGTTAAATGATCCGATTGATCAAGCTGAACGTT TCCAAGCGCAAGTTGCTGAAAAAGATGCTGGTGATGATGAAGCAATGCATTACGATGCAGAGTTTGTTGAAGCACTTGAA TATGGTTTACCTCCAACAGCGGGTGAAGGTATTGGTATTGACCGTTTGGTTATGCTTTTTGCAGATGCACCAAGTATTCG TGATGTGATTTTGTTCCCGCATATGCGTCGTAAAGAAGGTTAA Protein sequence : MPLHFYLTEAEMTQQNAQSTSEPTISENDLIAQRHAKLKQIQDVAKETGKSPWPNTFKREHYAADLQEQFKDQSKEQIES AEHVYVKVAGRVMLNRGSFMVIQDMTGRIQLYVDRKGLPKDTLETIKGLDLGDIIAAEGYIGRSGKGDLYVHLEGFELLT KSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHVIPGGASARPFETHH NALDMPLFLRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLAIDILG TTDVPYQGEVFSFKGPFKKISMFDAILENNPQFTPENVGDREFLAKFVREELKEEVKPGFGLGKLQTIVFEETVETKLRQ PTFITEYPAETSPLARRNDDNPHITDRFEFFIGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDEAMHYDAEFVEALE YGLPPTAGEGIGIDRLVMLFADAPSIRDVILFPHMRRKEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-128 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_001845618.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-128 | 55 |
