Gene Information

Name : LAF_0814 (LAF_0814)
Accession : YP_001843630.1
Strain : Lactobacillus fermentum IFO 3956
Genome accession: NC_010610
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 959317 - 960513 bp
Length : 1197 bp
Strand : +
Note : -

DNA sequence :
ATGACTAAACTTGATACCCAGCTGGTGCACGGGCCAGCCGTTAATGACAACTGTACCGGCGCCGTGACCACGCCGATTTA
CAAGGCAACAACCTTTGAATACCCCGAAATTGGGGCGCCGGTGACCTACGATTACTCGCGCTCGGGGAACCCGACCCGCC
AGGCGGTCGAAAATCAACTGGCGACCTTGGAAGGGGGCCAGCGGGCCTTCACCTTTGCCTCCGGGATGGCCGCTATCCAC
GCCGCCTTGGCGATCTTTAAGGCCGGCGACCACCTGATCGTGGGTGACCAAATTTACGGCGGCACCTTCCGTTTGCTTTA
CCAATTTTTCGCCCGCTGGGGGCTTGAAATCACGGCGGTCGACACCCGCGACCCGCAAGCCATTGAGGCCGCCATCCAGG
ACAACACCAAGGCAATTTACTTTGAACCGGTTACCAACCCCTTGTTGCAGGTGACATCGGTACGCCAGGTGGCCGTGATT
GCCAAGCAACACGGGCTCCTGACGATCGTCGATAACACCTTTTTGAGCCCCTACCTCTTAAAGCCACTAGAGCTGGGCGC
CGATCTGGTCATCCATTCGGCGACTAAGTACTTAGCCGGGCACTCGGAACTCTCGGCCGGGGCCGTGATCGTCAACGATC
CGCGCTTAGCCGACCGGGTTTACTTCGTCCAAAACGCCCTCGGCGGGATTTTGTCGCCGGAGGGGGCCAACGAACTGGCC
CGCGGGATCAAGACACTCGGGATCCGCTTGGACCGCCAAATTGAAAACCTGGTGGAAGTCGTGAAGTTCCTGGAAACCCG
GCCGGAAGTCCAGCGGGTGTACTACCCGGGGTTGCCGGGCCACGAGGGTTACGAAGAATTGCGCCAGGAGGCCAAGGGGG
CCGGGGCGGTGCTCTCCTTTGAGCTAAGCGGGGCGGTCGACCCGGTCGCCTTCGTCAACGGCCTGCGCCTCTTCACCCGC
GCCGTTAGCCTCGGGGCCGTCGAGAGCCTGGTCGAGTTGCCCAGCAAGATGAGCCACACCGAATTAACGTCCGAAGAACA
GTTGGCGGCCGGGATTAAACCGGGGCTGATCCGGTTGGCGATCGGGATCGAAGACGTGACCGACCTGATTGAAGACTTCG
CCCAGGCGCTGGACCAAGCCGAACTAGTGACTACCAAAGGAAGTGTTGAAGATGACCAAACAACCGCAATCAATTGA

Protein sequence :
MTKLDTQLVHGPAVNDNCTGAVTTPIYKATTFEYPEIGAPVTYDYSRSGNPTRQAVENQLATLEGGQRAFTFASGMAAIH
AALAIFKAGDHLIVGDQIYGGTFRLLYQFFARWGLEITAVDTRDPQAIEAAIQDNTKAIYFEPVTNPLLQVTSVRQVAVI
AKQHGLLTIVDNTFLSPYLLKPLELGADLVIHSATKYLAGHSELSAGAVIVNDPRLADRVYFVQNALGGILSPEGANELA
RGIKTLGIRLDRQIENLVEVVKFLETRPEVQRVYYPGLPGHEGYEELRQEAKGAGAVLSFELSGAVDPVAFVNGLRLFTR
AVSLGAVESLVELPSKMSHTELTSEEQLAAGIKPGLIRLAIGIEDVTDLIEDFAQALDQAELVTTKGSVEDDQTTAIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-79 44
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-80 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LAF_0814 YP_001843630.1 cystathionine beta-lyase BAC0207 Protein 7e-64 42