Gene Information

Name : LAF_0612 (LAF_0612)
Accession : YP_001843428.1
Strain : Lactobacillus fermentum IFO 3956
Genome accession: NC_010610
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 713905 - 714903 bp
Length : 999 bp
Strand : -
Note : -

DNA sequence :
ATGAGTTCGTACAACCATCTTACCTTAAAAGACCGAGAATGCATACTATTAGGCGTCACTTTGAAGGACACCTATCAAGT
TATTGCGCAGAGGATTGGGTGTTCTAAAGCCACCGTATCGCGCGAGATCAAACGCAATGGCGGTCGTAAGGCTTACTCAG
CCGTCAAGGCCCAAGAGAACTATCAGGGACGTCGACTAAAAAGCCGACGTCCTAGGCTTCTAACTAACTTGAAGTTACGG
GATTTTATCCTTCACTGTATTGTTCAACGTCAGTGGTCCCCGGAACAGATTTCAGGTCGTTTAGCCCACGAAAACAGCGA
ATGGCGTATCAGTTATAACACCATTTATCGTTGGATTGAACGCGATAATTTAGGCATCAAACGTAAGAGTCACGGGGCTT
GTGGCTTTGCCCGTAAGCTCCGTCACCGTGGTAAAACCCGAAAGGCCAAGGGAACCATTAAGGAACGTCGAGGACGATTT
AACGACGTCCCTTCCGTTCATGAACGCCCGGTTTCATGTGAGAATCGAAGCCGGTTTGGTCATTGGGAAGGTGATACAAT
TCGCGGTAAAACCGGGCGTTCAGCCCTGGTAACCTTAGTGGACCGTAAATCTCGGTATTTATTATCTCAGCGCGTTCTCA
AAGTAAACGCCAAGAACGTCACACAAGCGATGATTGACCTCCTGCATACCGTAACGCCTAAACGCGTTCGGACGCTTACG
CCGGACCGTGGAACTGAATTCGCAGGATACCGTGAAGTTAGCCAAGAACTAAGCATTCCAGTCTATTTTCCCGATCCCCA
TGCGCCCCAACAACGGGGAACCAATGAGAATACCAACGGGCTTATCCGTGAGTATTTCCCCAAAGGAACCGACCTAGACC
AACTAACTGATCAAGATATCGACAAGTTTGTCAGGGATTTAAATCACCGACCACGTAAGGTCTTAGGCTGGAAGAGTCCA
TTTGAAGTTTTCTTCGGGACAAAGTTGCGCTTGATTTGA

Protein sequence :
MSSYNHLTLKDRECILLGVTLKDTYQVIAQRIGCSKATVSREIKRNGGRKAYSAVKAQENYQGRRLKSRRPRLLTNLKLR
DFILHCIVQRQWSPEQISGRLAHENSEWRISYNTIYRWIERDNLGIKRKSHGACGFARKLRHRGKTRKAKGTIKERRGRF
NDVPSVHERPVSCENRSRFGHWEGDTIRGKTGRSALVTLVDRKSRYLLSQRVLKVNAKNVTQAMIDLLHTVTPKRVRTLT
PDRGTEFAGYREVSQELSIPVYFPDPHAPQQRGTNENTNGLIREYFPKGTDLDQLTDQDIDKFVRDLNHRPRKVLGWKSP
FEVFFGTKLRLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_02710 YP_005176177.1 ISApl1 transposase Not tested ICEPmu1 Protein 2e-54 46
unnamed CAC39292.1 - Not tested LPA Protein 3e-33 42