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Name : LAF_0402 (LAF_0402) Accession : YP_001843218.1 Strain : Lactobacillus fermentum IFO 3956 Genome accession: NC_010610 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : - Position : 480153 - 481502 bp Length : 1350 bp Strand : + Note : catalyzes the interconversion of D-xylose to D-xylulose DNA sequence : ATGAGTGATTTATGGCAAGGTATCGATAAGATTAGTTACGTTGGTAATAAAGGTAGTCTTAAGTCTGGTTTAGGTTTCCA ATACTACAACCCGGAAGAAGAAATCCTGGGTAAGAAGATGAAGGATTGGCTGCGCTTCTCAGTTGCCTACTGGCACACCT TTGACCAACGCTTGGTCGACCCGTTTGGTGATGGGACTGCTACCCGCCCATACGACAAGTACACGGATCCAATGGATAAC GCCTTAGCAAAGGTTGATTACGCCTTTGAATTTTACCAAAAGCTCGGCGTTGATTACCTTTGTTTCCACGACCGTGACTT GGCGCCGGAGGGTGACACCCTGCGGGAATCCAACGCCAACCTAGATAAGGTAATTGACAAGATCGTGGAAAACCAAAAGG CAACCGGGATGAAGGTGCTGTGGAACACTTCCAACCTCTTTACCAACCCACGTTTCTTATCCGGGGCTGGGACGGCGCCA TCGTCAAAGATTTATGCCTACGCTTGTGCCCAGTTGAAGCACAGTCTGGAAGTTGGGAAGCGGGTTGGCGCTGAGAACTA CGTCTTCTGGGGTGGTCGTGAAGGTTACGAATCCCTTTGGAACACCGAAATGAAGCGTGAGCAAGCCCACATTGCTAAGA TGTTCCACCTGGCCAAGGATTACGCTGATGAAATTGGTTTTGATGCTCAGATGCTTCTGGAACCAAAGCCAAAGGAACCA ACGACGCACCAATACGACTTCGATGCCGCCACGACGATTGCCTTCATGAAGGAATATGGCTTAGACAAGGACTTCAAGCT AAACTTGGAAGGCAACCACGCAAACTTAGCCGGTCACACTTACCAGCACGAAATCCGCGTTGCTAGAGAAGCCGGGATGC TGGGCTCCCTGGATGCTAACCAAGGTGATAAGCTAATTGGTTGGGACATTGATGAGTTCCCGTCCAACCTTTACGAAACG ACGGCCGCAATGTGGGAAGTCGTTGAAAACGGTCAAATTGGGCCACGCGGTGGTTTGAACTTTGACGCCAAGCCACGCCG GACCTCTTGGCAAGCAGAAGACCTCTTCTACAGCCACATTGTCGGGATGGATTCCTTTGCAGCCGGTCTGCGAGTGGCAG CAGCTATGAAGGAAGACGGCTTCTTGGATGACGTTTTGAAGACCCGTTATGCTTCATGGGACGAAGGTCTGGGCAAGGAC ATCGAAGACGGCAAGGAAGACTTCAAGAGCCTAGAAGAAAAGCTTTTGGACACCCCACAAGCTGAATTGCGGGCGGCAAC TCAATCTGACCACCTTGAACAGATCAAGGACACGATTAACCACTACATCATCCAAACCTTAGCAAAGTAA Protein sequence : MSDLWQGIDKISYVGNKGSLKSGLGFQYYNPEEEILGKKMKDWLRFSVAYWHTFDQRLVDPFGDGTATRPYDKYTDPMDN ALAKVDYAFEFYQKLGVDYLCFHDRDLAPEGDTLRESNANLDKVIDKIVENQKATGMKVLWNTSNLFTNPRFLSGAGTAP SSKIYAYACAQLKHSLEVGKRVGAENYVFWGGREGYESLWNTEMKREQAHIAKMFHLAKDYADEIGFDAQMLLEPKPKEP TTHQYDFDAATTIAFMKEYGLDKDFKLNLEGNHANLAGHTYQHEIRVAREAGMLGSLDANQGDKLIGWDIDEFPSNLYET TAAMWEVVENGQIGPRGGLNFDAKPRRTSWQAEDLFYSHIVGMDSFAAGLRVAAAMKEDGFLDDVLKTRYASWDEGLGKD IEDGKEDFKSLEEKLLDTPQAELRAATQSDHLEQIKDTINHYIIQTLAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 2e-106 | 53 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 2e-106 | 53 |
