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Name : LAF_0401 (LAF_0401) Accession : YP_001843217.1 Strain : Lactobacillus fermentum IFO 3956 Genome accession: NC_010610 Putative virulence/resistance : Unknown Product : D-xylose transport protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 478437 - 479816 bp Length : 1380 bp Strand : - Note : - DNA sequence : ATGAAAAAAGTTTCTACCAACTTCATCTACTTCTTTGGCGCGCTTGGGGGGCTCCTCTTCGGTTACGATACTGGGGTCAT CTCCGGGGCAATCCTCTTCATCGAAAAGCAAATGCACCTTGGCTCCTGGGGGCAAGGAATAGTTGTTTCCGGGGTGCTGC TCGGCGCAATGATCGGGTCTCTGGTCATTGGGCCAAGTTCTGACCGCTATGGCCGGCGAAAGTTACTCTTGCTATCATCT ATTATCTTTATTATTGGTGGTTTAGGCTGTGCGTTCGCTTCTAACGCCTTAATCTTAATTTTATTCCGGGTCGTCCTTGG TTTAGCCGTGGGGGCTGCCTCCTCAATGGTGCCTACTTATTTAGCCGAACTTTCTCCCGCCGTTAAACGCGGGGTTGTTT CCTCTCTCTTCCAAGTGATGGTGATGACCGGGATCTTCCTAGCATACGTTGTTAACTGGGGGTTGCAAGGCTTCTACACC GGTTGGCGTTGGATGCTGGGGTTGGCTGCCCTGCCGGCTACCATCATGTTCTTAGGGGGGCTTTTTCTCCCCGAATCTCC CCGCTACCTCGTCAAAATCGGTAAATTAGACGAGGCCAAAGCAGTCTTAATAAATATTAACAAGGGTGACCAACAAGCGG TCAACGTTGACTTAGAGAAGATCACCGAACAGGTCAATATGAAAAACGAAGGACTTAAAGAGCTCTTTGGGCCAATGGTT CGTCCTGCATTGATCGCCGCCATCGGTTTAACCATCTTCCAACAGGTAATGGGGTGCAACACCGTTCTGTATTACGCACC GACCATCTTTACTGACGTCGGTTTCGGGGTTAATGCCGCCCTCTTAGCTCACCTAGGGATTGGAATCTTCAACGTCATTG TTACCATTATTGCCATGTCCTTAATGGATAAGATCGACCGCAAGAAGATGTTAATCTGGGGTGGTCTCGGGATGGGGATC TCCCTGTTCGTTATGAGCCTTGGAATGAAGTTCTCCGGTGGTTCCAAAACGGCTGCCATCATTTGTGTCCTCGCTATGAC CATCTACATCGCCTTTTTCTCTGCTACCTGGGGACCCGTGATGTGGGTGATGCTCGGGGAAATCTTCCCGCTCAACATTC GTGGCCTCGGTAACTCATTTGGCTCCTTTGTCAACTGGTTTGCCAACATGATCGTTTCCCTCACCTTCCCGTTTTTACTG GATTTCTTTGGAACCGGGAGTCTTTTCATCGGTTATGGGGTACTTTGCTTCCTTGGAATCTGGTTTGTTCACACCATGGT TTTCGAAACCCGTGGGCGTTCCTTAGAAGACATTGAAGAAAGCCTGCGGGAAAAAGCAACCGCCAAAGATGGAAAAGCTC TAAAAACCGCCACTAAGTAA Protein sequence : MKKVSTNFIYFFGALGGLLFGYDTGVISGAILFIEKQMHLGSWGQGIVVSGVLLGAMIGSLVIGPSSDRYGRRKLLLLSS IIFIIGGLGCAFASNALILILFRVVLGLAVGAASSMVPTYLAELSPAVKRGVVSSLFQVMVMTGIFLAYVVNWGLQGFYT GWRWMLGLAALPATIMFLGGLFLPESPRYLVKIGKLDEAKAVLININKGDQQAVNVDLEKITEQVNMKNEGLKELFGPMV RPALIAAIGLTIFQQVMGCNTVLYYAPTIFTDVGFGVNAALLAHLGIGIFNVIVTIIAMSLMDKIDRKKMLIWGGLGMGI SLFVMSLGMKFSGGSKTAAIICVLAMTIYIAFFSATWGPVMWVMLGEIFPLNIRGLGNSFGSFVNWFANMIVSLTFPFLL DFFGTGSLFIGYGVLCFLGIWFVHTMVFETRGRSLEDIEESLREKATAKDGKALKTATK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0071 | YP_251986.1 | hypothetical protein | Not tested | SCCmec | Protein | 4e-66 | 41 |
