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Name : LAF_0041 (LAF_0041) Accession : YP_001842857.1 Strain : Lactobacillus fermentum IFO 3956 Genome accession: NC_010610 Putative virulence/resistance : Unknown Product : ABC transporter permease Function : - COG functional category : V : Defense mechanisms COG ID : COG0842 EC number : - Position : 51982 - 53097 bp Length : 1116 bp Strand : - Note : - DNA sequence : ATGCGTAGTTTAGCCATCACCAAACGGATCCTAACCGAATTGATCCGCGACAAACGTACCCTGGCCCTGCTCTTTATCGC CCCCATTTTAACCATGTGGCTCCTATCGATTATGTTTTCAGCCACCACTGATACCCACGTAACGATCGGGACGGCCAACC TTTCCTCGTCGTTAGTCAAGCAAATCGACGTCGTCAAGCACGTCTCGGTCAAGACTTACGCCAGCGCTGACCAGGCCGAC CGAGCCCTCAAGGACTACCGCATCGACGCCACCGTGGTCAAAACCAGCGCCAATCACTACCACCTAACCTTTGCCAACAT CGACTCGGCCAAGACCGCTTTGACCAAGCAAGCCTTCCAAGTCGCCCTGCAAAAGAGCAATGCCCACCAACTGGCGGCCA CCATACAGCGACTGGTGGCGATGTTGCCAACGACGGCGCAGGATCAATTCAACCAGGGGACCGCGAGCGCCACGACCCAC ATCAAGTCGACCTACCGCTACGGTGATTCTTCGACCGGTTACTTCACCAAGATCTTACCAATCTTCATGGGCTTTTTCGT CTTCTTCTTTGTCTTCTTGATCTCCGGGATCGGCCTCCTGCGCGAACGCAGCTCCGGCACCCTTGACCGACTCCTGGCCA CCCCGGTCCGGCGCGGCGAAATCGTCACCGGCTACATGGTTTCTTACGGGGTAGTCGCGATCGTGCAAACCCTCTTAATT GTCATCACCACGGTCTGGCTCCTAAAGGTCCAAATCGTCGGTGACTTGGCCCTGGTCTTTTTAATCAACATCTTGTTGGC CCTGGCGGCACTAGCAATGGGAATCTTTATCTCCACCTTTGCCAGCTCGGAATTTCAAATGATGCAGTTCGTGCCGATCG TGGTCATGCCCCAGGTCTTTTTCTCCGGCATCGTGCCACTGGACGCCTTGCCAAACTGGATTCAGGTCATCTCAAAAATC CTGCCATTAACCTACGCCGGCAACGCCATGAACGACGTGATCATGAAGGGGCAAGGGGTTGAAACGATCGCCGGTGACCT TGGCGTCTTAATCCTCTTCATCGTCTTCTTCGTGGTCTTAAACGTGATGGGCTTAAAACGTTACCGCAAGGTTTAA Protein sequence : MRSLAITKRILTELIRDKRTLALLFIAPILTMWLLSIMFSATTDTHVTIGTANLSSSLVKQIDVVKHVSVKTYASADQAD RALKDYRIDATVVKTSANHYHLTFANIDSAKTALTKQAFQVALQKSNAHQLAATIQRLVAMLPTTAQDQFNQGTASATTH IKSTYRYGDSSTGYFTKILPIFMGFFVFFFVFLISGIGLLRERSSGTLDRLLATPVRRGEIVTGYMVSYGVVAIVQTLLI VITTVWLLKVQIVGDLALVFLINILLALAALAMGIFISTFASSEFQMMQFVPIVVMPQVFFSGIVPLDALPNWIQVISKI LPLTYAGNAMNDVIMKGQGVETIAGDLGVLILFIVFFVVLNVMGLKRYRKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH2614 | YP_254529.1 | hypothetical protein | Not tested | ¥ðSh2 | Protein | 3e-52 | 46 |
| SH0082 | YP_251997.1 | hypothetical protein | Not tested | SCCmec | Protein | 5e-49 | 45 |
| SE0095 | NP_763650.1 | hypothetical protein | Not tested | SCCpbp4 | Protein | 8e-50 | 45 |
