Gene Information

Name : LAF_0396 (LAF_0396)
Accession : YP_001843212.1
Strain : Lactobacillus fermentum IFO 3956
Genome accession: NC_010610
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 472277 - 473164 bp
Length : 888 bp
Strand : +
Note : -

DNA sequence :
GTGACCTTAATTGATGATCTGAGGCGAGTCTTCAAAACGTCGATTAGTTTTATCCTCAAAGCCGTTAAGATACCACGTAG
CACGTACTATTACACTAAGCACAGCCAGGGACGAAAATATGATGATGACCAGGTTATCCAAGCCATTGATGAAATTCGCC
AAACAGATGCCAAGTATACTCAAAAATACGGTTACCGTCGCATAACGTTAGTTATGCATGAACAGGGATTTAAAGTTAAT
CACAAACGCGTCCTCCGAATTATGAAGGAACAAGGCTGGACATGTCAGGCCTTTAATAAGCAAACTCGTAAATATAACTC
ATACAAAGGAGTTGTTGGTAGAATCGCCAAAAACAAGTTACACCGGCGATTCAAGACAGATCGACCATATCAAAAACTTG
TCGCCGACGTTAGTGAATTTCGATACGGTCAGATGAGTCAAAGTGAACGAATCTATTTAGAGCCCATCATGGATTTATTT
TCGGGTGAAATTTTGGCATTTAACATTAGTGCACATCCAACTCTTGAGTTTGCGTTGAAGCCACTAAAAGAAGCATTAGA
TGGACTACCTGAGCTTCCTTATCGAACAACGGTACACACAGATCAAGGATTTCAGTACCAACATAAGCAGTGGCAAAAAA
CGCTTAAAACTCATCATACCTTTCAGAGTATGTCCCGTAAGGCGACTTGCTTAGATAACGCCGCCATGGAATCATTCTTT
CATCTCATGAAAGCAGAGATGATGGATGAACACTTCGAAAATCCAGAGAGTCTCGCGCAAGCGATGACTGAATGGATTGA
GTTTTATAATAACCGTAGAATCAGGACCAAGCTAAAAGGCAAGTCACCAGTACAATACCGAGAACTTGCCAATCAGTTAG
TAGCTTAA

Protein sequence :
MTLIDDLRRVFKTSISFILKAVKIPRSTYYYTKHSQGRKYDDDQVIQAIDEIRQTDAKYTQKYGYRRITLVMHEQGFKVN
HKRVLRIMKEQGWTCQAFNKQTRKYNSYKGVVGRIAKNKLHRRFKTDRPYQKLVADVSEFRYGQMSQSERIYLEPIMDLF
SGEILAFNISAHPTLEFALKPLKEALDGLPELPYRTTVHTDQGFQYQHKQWQKTLKTHHTFQSMSRKATCLDNAAMESFF
HLMKAEMMDEHFENPESLAQAMTEWIEFYNNRRIRTKLKGKSPVQYRELANQLVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 1e-43 41
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 7e-34 41
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 7e-34 41