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Name : LAF_0033 (LAF_0033) Accession : YP_001842849.1 Strain : Lactobacillus fermentum IFO 3956 Genome accession: NC_010610 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 36473 - 38566 bp Length : 2094 bp Strand : + Note : - DNA sequence : ATGGCACGAATTCCAGTAGATCCATTTAACAACGACATGGACGACTTATTTAACCAACTCATGGGGGGAATGAACGGGTT CAACAGCGACAACCGCCGTTACCTGATTAACGGGCGCGAAGTAACGCCTGAAGAGTACGCCGCCTTTCGCCAGACCGGGA AGCTCCCGGGTGCAACTGACCCAACCCAAGCAAAAACTAAGCAACCACAACCAGACAGCATGCTAGCTAAGCTCGGCCGC AACTTGACGCAAGAAGCCAAGGAAGGCAAGCTCGACCCGGTGATCGGCCGTAACAAGGAGATTCAAGAAACCGCCGAGAT TCTGTCACGGCGGACCAAGAACAACCCAGTGTTAGTCGGTGACGCCGGGGTCGGCAAGACGGCGGTGGTGGAGGGCCTAG CCCAAGCCATCGTGGCCGGCGACGTTCCCGCTGCCATCAAGAACAAGCAGATTATTTCGATTGACATTTCCAGCTTGGAG GCCGGGACCCAATACCGGGGCTCCTTTGAAGAGAACATGCAAAAGCTGATCGACGAGGTCAAAAAGGACGGCAACGTGAT CCTCTTCTTCGATGAAATTCACCAAATCATCGGGGCCGGAAACGCCGGCGACGCCTCGGGTTCCAAGGGGATGGCTGATA TCTTAAAGCCGGCCCTTTCCCGCGGTGAAGTGACCTTAATCGGGGCCACCACCCAAGACGAGTACCGTAACACGATCTTA AAGGACGCCGCTTTATCCCGGCGGTTCAACCAAGTAACGGTTAACGCCCCGAGCAAGGAAGACACTTTCAAGATCCTGCA AGGTTTGCGTAAGCTTTACGAAAAGCACCATAACGTTTCCTTGCCCGACGACGTCTTAAAGGCCGCCATCGATTACTCGG TTCAATACATTCCGCAACGCTCCTTACCTGACAAGGCGATCGACTTGATTGACGTCACGGCCGCTCACCTGGCCTCCAAG CACCCGGTCAAGGACGCCAAGACGATTGAAGAGGAGATCAAAAAGGCCGAGGCCAAGCAACAAGAAGCGGTTGAAAAAGA GGATTACCAAGCCGCCCAAGAGGCCAAGGACCAGGTGGCCAAGTTGCAAGACCAACTCAAGGACCACTCCGAATCCGAAC GGGTCGTGGCAACGCCGAGTGACGTGGCCGCCGCCGTTGAACGGATGACCGGGATCCCGGTGTCCAAGATGGGTGCTTCC GATATCGAACGCTTAAAGGGCTTAGCCACCCGTTTGGAAGGCAAGGTTATCGGCCAACAAGAGGCCGTCGAAGCCGTTAG CCGGGCGATCCGGCGTAACCGGGCCGGCTTTGATGAAGGTAACCGGCCAATTGGGAGCTTCCTTTTCGTCGGCCCAACCG GGGTCGGTAAGACCGAATTGGCTAAGCAACTAGCCCTCGATATGTTTGGTTCCACCAACGACCTCATCCGGCTCGACATG TCCGAATACACCGACCGGACGGCGGTTTCCAAGTTGATCGGGACCACCGCTGGCTACGTGGGTTACGACGATAACTCCAA CACCCTGACCGAAAAGGTACGGCGTCACCCGTACTCGATCGTCTTGCTCGACGAAATCGAAAAGGCCAACCCGCAAGTCA TCACCTTGCTCTTGCAAGTCTTAGATGATGGGCGCCTAACCGATGGGCAAGGGAACACGGTGGACTTCAAGAACACCATC ATCATCGCCACCTCTAACGCCGGCTTCAGTAGCGACGCCGTGGCGGGCGAGGACGCTAAGTTGATGGACAAGTTGCAACC GTACTTCCGGCCAGAATTCCTGAACCGGTTTGACGCAATCGTGGAATTCCACGCCCTGACCAAGGACGACTTAAAGCAAA TCGTCGACCTGATGTTAGCCGGGGTTAACGAAACCTTGGCCAAGAAGGGGATGGACGTCACGGTGACCGATGAAGTGAAG AACTACCTGATTGACAAGGGCTATGACAAGACGATGGGGGCCCGGCCACTGCGGCGGGTGGTGGAACAAGAGATCCGTGA CAAGGTGACGGATTACTACCTCGACCACCTGGACGAAAAGCACCTCGTGGCCACCTTAAAGGACGGCCAAGTCGTGATTG AACAAGCAAAGTAA Protein sequence : MARIPVDPFNNDMDDLFNQLMGGMNGFNSDNRRYLINGREVTPEEYAAFRQTGKLPGATDPTQAKTKQPQPDSMLAKLGR NLTQEAKEGKLDPVIGRNKEIQETAEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVAGDVPAAIKNKQIISIDISSLE AGTQYRGSFEENMQKLIDEVKKDGNVILFFDEIHQIIGAGNAGDASGSKGMADILKPALSRGEVTLIGATTQDEYRNTIL KDAALSRRFNQVTVNAPSKEDTFKILQGLRKLYEKHHNVSLPDDVLKAAIDYSVQYIPQRSLPDKAIDLIDVTAAHLASK HPVKDAKTIEEEIKKAEAKQQEAVEKEDYQAAQEAKDQVAKLQDQLKDHSESERVVATPSDVAAAVERMTGIPVSKMGAS DIERLKGLATRLEGKVIGQQEAVEAVSRAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGSTNDLIRLDM SEYTDRTAVSKLIGTTAGYVGYDDNSNTLTEKVRRHPYSIVLLDEIEKANPQVITLLLQVLDDGRLTDGQGNTVDFKNTI IIATSNAGFSSDAVAGEDAKLMDKLQPYFRPEFLNRFDAIVEFHALTKDDLKQIVDLMLAGVNETLAKKGMDVTVTDEVK NYLIDKGYDKTMGARPLRRVVEQEIRDKVTDYYLDHLDEKHLVATLKDGQVVIEQAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 9e-133 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LAF_0033 | YP_001842849.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 7e-153 | 51 |
| LAF_0033 | YP_001842849.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 1e-136 | 46 |
