Gene Information

Name : LAF_0298 (LAF_0298)
Accession : YP_001843114.1
Strain : Lactobacillus fermentum IFO 3956
Genome accession: NC_010610
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : -
Position : 367930 - 368931 bp
Length : 1002 bp
Strand : +
Note : catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation

DNA sequence :
ATGGCTTTTAACTTACGTAACCGCAGTTTCTTAACTTTGGCTGACTTTAACACTCGTGAAATGGAATACATGCTCGACCT
CGCTGAGGATTTGAAGAAGGCTAAGTACGCCGGGACGGAACAACAACACTTAAAGGGTAAGAACATCGCTTTAATCTTTG
AAAAGAGCTCCACGCGGACCCGTTGCTCCTTTGAAGTAGGGGCTAAGGATCAAGGGGCGCACGTTACCTACCTCGGCCCA
TCTGGTTCCCACATCGGCCACAAGGAATCCGTTAAGGATACCGCACGGGTACTCGGGGGGATGTTCGACGGGATCGAATA
CCGTGGTTTCTCCCAACGTAACGTTGAAATTTTGGCCGAATACTCCGGGGTACCGGTTTGGAACGGGTTAACTGACGAAG
ACCACCCAACTCAAGTCTTGGCCGACTTTTTGACCGCTCACGAAGTACTGAAGAAGCCATACCAACAAATCAAGTTTGCC
TTTGTTGGTGACGGCCGCGATAATGTTTCCAACGCCTTGATGTTAGGGGCGGCCGTAATGGGGATGGAATACCACGTGGT
CACGCCAAAGGAACTTGAACCAGAAGCCGAAACCTTGGCAAAGGCTAACGAAATCGCCGCTAAGACCGGGGCTAAGATTG
TCGTAACTAACGACGTTAAGGCCGGGGTTAAGGGCATGGACGTAATCTACGCCGACGTATGGGTTTCCATGGGTGAATCC
GACGACATGTGGGCAAAGCGGATTGAACTGCTTAAGCCGTACCAAGTTACCAAGGAAGTCATGGAAGCAACCGAAAACCC
GAAGGCGATCTTCGAACACTGCTTACCTGCCTTCCACAACACGGAAACGGAAGTCGGCAAGGAAATCGCTGAAAAGTTTG
GCCTGACGGAAATGGAAGTTACCGACGAAGTCTTTGAAAGTGAACAATCGGTGGTCTTCCGTGAAGCCGAAAACCGGATG
CACACGATCAAGGCCGTAATGGTAGCAACCTTAGGGGACTAA

Protein sequence :
MAFNLRNRSFLTLADFNTREMEYMLDLAEDLKKAKYAGTEQQHLKGKNIALIFEKSSTRTRCSFEVGAKDQGAHVTYLGP
SGSHIGHKESVKDTARVLGGMFDGIEYRGFSQRNVEILAEYSGVPVWNGLTDEDHPTQVLADFLTAHEVLKKPYQQIKFA
FVGDGRDNVSNALMLGAAVMGMEYHVVTPKELEPEAETLAKANEIAAKTGAKIVVTNDVKAGVKGMDVIYADVWVSMGES
DDMWAKRIELLKPYQVTKEVMEATENPKAIFEHCLPAFHNTETEVGKEIAEKFGLTEMEVTDEVFESEQSVVFREAENRM
HTIKAVMVATLGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 9e-126 74
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-122 72
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-122 72
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 7e-123 72
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 7e-123 72
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-122 72
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-122 72