|
Name : LAF_0267 (LAF_0267) Accession : YP_001843083.1 Strain : Lactobacillus fermentum IFO 3956 Genome accession: NC_010610 Putative virulence/resistance : Unknown Product : transcription antitermination protein Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 332846 - 333391 bp Length : 546 bp Strand : + Note : - DNA sequence : GTGGAAACAAACGAAAAACGTTGGTATGTTTTGCATACTTACTCCGGTTACGAAAACCGTGTTAAGAGTAACTTGGAATC CCGGGCCCAATCAATGGGGATGGAAGACTACATCTTCCAAGTGGTGGTTCCGGAAGAAACGGTTCGCCAAGTCAAGGACG GCCAAGCAAAAGAGGTCGAAGAAAAGACCTTCCCTGGTTACGTCCTAGTTGAAATGGTGATGACTGACCAAGCCTGGTAC GTTGCCCGAAACACCCCTGGCGTAACTGGTTTCTTAGGTTCGCACGGTGGGGGATCCAAGCCGACCCCGCTCCTTCCTGA AGAAGTGGATCGGATCCTAGTACGGATGGGCCAAGATGTTGCCCGCACCGATATCAACGTTGCAGTTGGTGACAACATTA AGATCATCGCCGGGGCCTTTGCGGACCTGTCCGGGAAGGTGATCGAAGTCGACCGCGACAAGTTGAAGTTAAAGGTTGAA ATTGAAATGTTTGGCCGCTTGACGACGACTGAACTAGACTTCAACCAGATCGATACGGTGGAATAA Protein sequence : METNEKRWYVLHTYSGYENRVKSNLESRAQSMGMEDYIFQVVVPEETVRQVKDGQAKEVEEKTFPGYVLVEMVMTDQAWY VARNTPGVTGFLGSHGGGSKPTPLLPEEVDRILVRMGQDVARTDINVAVGDNIKIIAGAFADLSGKVIEVDRDKLKLKVE IEMFGRLTTTELDFNQIDTVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nusG | YP_006310753.1 | transcription antitermination protein NusG | Not tested | FWisland_4 | Protein | 2e-46 | 56 |
| nusG | YP_281502.1 | transcription antitermination protein NusG | Not tested | Not named | Protein | 1e-43 | 54 |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 3e-32 | 42 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 3e-32 | 42 |
