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Name : LAF_0224 (LAF_0224) Accession : YP_001843040.1 Strain : Lactobacillus fermentum IFO 3956 Genome accession: NC_010610 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 271367 - 272860 bp Length : 1494 bp Strand : + Note : - DNA sequence : ATGGCGAATGAAGAGCATTTGAACGACCAGATGGTGGTTCGACGGGAAAAGATGCAGGCATTAAGGGACCAAGGGGTGGC GCCGTTTGGTCACCGTTTTGATCCGGACCACGATTTATCCACGGATATCCGCAAGAAGTACGAAAACGATAGCGGTGAAC TACTGTTAGCCCAACACAACGTCGTAACGATTGCGGGACGGATGATCGGAAAACGGGGAAGCGGGAAGGCGTCCTTTGCC GACCTATTGGACCGGGGAGGCAAGATCCAATTCTACGTTCGCCAAGATATGGTGGGGGAAGAAGCCTACAAGCTATTCAA AGAATCCGACTTAGGGGATTTCTGGGGGATTACTGGTGATGTAATCAAAACCCGGATGGGCGAACTGACGGTGCGGGCCG AAAAGATTACCTTTTTATCCAAGGCCCTCCGTCCGCTGCCGGATAAGTACCACGGCTTGCAGGACCCAGAGTTAGTCTAC CGTCAGCGTTACTTGGACCTGATCACTAACCGGGAAAGCTTCGAACGTTTCCAAACCAGGACTAAGATTATTAAAGCCGT GCGCCGTTACATGGACGATAATGGCTTCTTAGAGGTGGAAACCCCCATCCTAGAAAACATTGCCTCCGGGGCTGAGGCGC GGCCGTTTGTGACCCACCACAACGCCTTAAACATTGATATGTACATGCGAATTGCCACCGAACTACGGCTTAAGCGCCTA ATTGTCGGCGGGATGGAACGAGTTTACGAACTGGGGCGGATCTTCCGTAACGAAGGGATGGACCCGTACCACAACCCTGA ATTCGATACGATGGAAACCTACGCCGCTTACTTCGACTTCAACGACGTGATGAAGGAAACGGAAGGGATTTTTAAGGCTG CCGCTGGTGTAGTTGCTGATGACTTAAAGATTACCTACCAAGGAACGGAACTCGATTTCAGTACCTCCTTTAAGCGTCTC CACATGGTGGATGCCATTAAGGAAGCAACGGGAATCGACTTCTGGCAAGAAATGACCGTTGAAGAGGCCCGTAAGCTGGC TGATGACAACGGAATTAAATACGAGAGTTGGTGGAAGGTTGGTCACATTATTAACGCCTTCTTTGAAGAAAAGGTTCAAG ATACCTTGGAACAACCGATTTTTATCTATGGTCACCCGGTAGAAGTCTCACCGTTAGCAAAGATTAACGAAGAGGATTCC CGTTTTACTGACCGGTTTGAACTGTACATTTTGGGTAAGGAATACGCGAATGCCTTCTCTGAATTAAACGACCCAATTGA TCAACGCAAGCGTTTTGAGGCACAAGCTCAAGAAAACGCTGAGGGTAACGATGAAGCCCAGCCGATTGACGAGGACTTTG TTGAAGCACTCGAATACGGGATGCCGCCTACCGGTGGGCTCGGGGTCGGAATCGACCGGATGGTAATGTTGATGACGGAC GCAAAGTCAATTCGCGACGTCTTATTATTCCCAACGATGCGACCAAAGAAGTAG Protein sequence : MANEEHLNDQMVVRREKMQALRDQGVAPFGHRFDPDHDLSTDIRKKYENDSGELLLAQHNVVTIAGRMIGKRGSGKASFA DLLDRGGKIQFYVRQDMVGEEAYKLFKESDLGDFWGITGDVIKTRMGELTVRAEKITFLSKALRPLPDKYHGLQDPELVY RQRYLDLITNRESFERFQTRTKIIKAVRRYMDDNGFLEVETPILENIASGAEARPFVTHHNALNIDMYMRIATELRLKRL IVGGMERVYELGRIFRNEGMDPYHNPEFDTMETYAAYFDFNDVMKETEGIFKAAAGVVADDLKITYQGTELDFSTSFKRL HMVDAIKEATGIDFWQEMTVEEARKLADDNGIKYESWWKVGHIINAFFEEKVQDTLEQPIFIYGHPVEVSPLAKINEEDS RFTDRFELYILGKEYANAFSELNDPIDQRKRFEAQAQENAEGNDEAQPIDEDFVEALEYGMPPTGGLGVGIDRMVMLMTD AKSIRDVLLFPTMRPKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-109 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LAF_0224 | YP_001843040.1 | lysyl-tRNA synthase | VFG1668 | Protein | 2e-109 | 45 |
