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Name : rpmE2 (LAF_0204) Accession : YP_001843020.1 Strain : Lactobacillus fermentum IFO 3956 Genome accession: NC_010610 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L31 type B Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0254 EC number : - Position : 249821 - 250066 bp Length : 246 bp Strand : + Note : RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially g DNA sequence : ATGAAGCAAGGAATTCACCCAGATTACCACTTGGTAGTCTTCGAAGACTCAGCAACTGGTTACAAGTTTATCTCCGGTTC AACGGCTACTTCCAAGGAAACCGTTGAATGGGAAGATGGTAACGAATACCCGCTTGTCCGGGTTGAAGTTACGTCCGACT CCCACCCGTTCTACACTGGGAAGCAAAAGTTCACCCAGGCCGACGGGGCAGTCGACAAGTTCAACAAGAAGTACGGTTTC AAGTAA Protein sequence : MKQGIHPDYHLVVFEDSATGYKFISGSTATSKETVEWEDGNEYPLVRVEVTSDSHPFYTGKQKFTQADGAVDKFNKKYGF K |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rpmE2 | NP_286687.1 | 50S ribosomal protein L31 | Not tested | TAI | Protein | 5e-12 | 44 |
| rpmE2 | NP_287095.1 | 50S ribosomal protein L31 | Not tested | TAI | Protein | 5e-12 | 44 |
