Gene Information

Name : LAF_1784 (LAF_1784)
Accession : YP_001844600.1
Strain : Lactobacillus fermentum IFO 3956
Genome accession: NC_010610
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2036778 - 2037449 bp
Length : 672 bp
Strand : -
Note : -

DNA sequence : 
ATGTCAAATCTAATTCTTGAATCGGTGACAAAAGTTTTTGGAGAAGGGAGTAGTAAGTACGTAGCGCTGGAAAATATTAA
TTTTAAAGCAGAAAGTGGTCAGCTTATTTTAGTTGTAGGGCCATCAGGATCAGGAAAAACTACATTTTTGACTATAGCCG
GTGGGCTGCAGACACCAACTGAGGGTGACGTAAAAATAAATGACAGCACAATTAAAAGTTTATCCAAAAAACAGCAAACA
AAATTAAGATTGGAAAAAATAGGATTTGTTTTACAATCTTATAACTTAGTTCCATTTTTAACGGTCGAAGAACAATTTAA
ATTAGTAGATAAACTAAAAAAACAAAATTTAACTGAACAAAAAATGCATGAACTTCTATCTGATTTAGGACTTTTAGAAC
TCCTAAAAAAATATCCTAATCAACTTTCTGGTGGACAAAAGCAACGTGTGGCAATTGCTAGAGCATTATACACTGATCCT
GACTATATCTTAGCGGATGAACCCACAGCTGCCTTAGATACGGATAGATCTATGAAAGTAATCGAGTTACTCAGAGATTT
AGCACATAAGAGAAATAAAATTATTATTGTAGTTACTCATGACTTAAGGTTAAAAAATACGGCAGACAAAGTTTATCAGA
TAATTGATGGTAAGATGCAAATGATAAATTAG

Protein sequence : 
MSNLILESVTKVFGEGSSKYVALENINFKAESGQLILVVGPSGSGKTTFLTIAGGLQTPTEGDVKINDSTIKSLSKKQQT
KLRLEKIGFVLQSYNLVPFLTVEEQFKLVDKLKKQNLTEQKMHELLSDLGLLELLKKYPNQLSGGQKQRVAIARALYTDP
DYILADEPTAALDTDRSMKVIELLRDLAHKRNKIIIVVTHDLRLKNTADKVYQIIDGKMQMIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 6e-45 51
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 8e-41 50
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-30 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LAF_1784 YP_001844600.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 6e-30 43