Gene Information

Name : LAF_1742 (LAF_1742)
Accession : YP_001844558.1
Strain : Lactobacillus fermentum IFO 3956
Genome accession: NC_010610
Putative virulence/resistance : Unknown
Product : ribokinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0524
EC number : -
Position : 1980145 - 1981092 bp
Length : 948 bp
Strand : +
Note : -

DNA sequence : 
ATGACCCACGATATTACTGTAATTGGCTCCAACATGATGGAATTAACGACCGATATTGACCGCATGCCTAAGTTAGGGGA
AACTGTTAGCGCCCCAAGTTTTCACATGGCCTTTGGGGGAAAGGGGGCTAACCAAGCTTACGCCGCCGCTCAACTAGGCT
CCTCAGTGGCCATGATTTCAAAGGTGGGCTCCGACAGTCTTGGTCAAGCCTACTTGGAACACTTCCAACAGAGCGGCATT
GACATTACGGGCGTTAGCGTCGGTAACCAAAGTAATGGAGTGGCGCCATGCTTCATCCAAGGCAATATGAACAGTATCAT
CGTGGTTCAAGGGGCTAACAGTGAGTTAACGCCAGACGTTCTTGATCAATACACCGATCTCATCAAAAGCTCCAAAATGG
TTATCTTGCAACAAGAGATTTCGCTGGCAACGGACTACCGAGCCATTGACCTAGCTGAACAATTCCATGTTCCGGTGATG
CTAAACCCAGCTCCCGCGAATGATAACGTTGACTTAGAACACATCACCAAGTGCGAGTTTTACTCTCCAAACGAAACGGA
ACTCGGTCGTCTCACCCACCTGCCGGTAGAATCTATCGACCAAATTAAAGACGCTGCCCATTCCCTTGTTGACCAAGGGG
TTAAAAACGTAATTGTCACAATCGGAAGTCGAGGAGCACTCTGGGTTTGTGCGGATCATGAAGAGCTCATCCCCTCTTAC
AAAGTCAATGCCGTTGACTCCATCGGGGCTGGCGACTCATTCGTGGGGGCCTTTGCCCACTACTACACGAATGGTGAAGA
CATCCCAACTGCTTTAAGGCACGCCAACGCCTACGCCGCCGTTACCGTAACGATGTCCGGAAGCCAAACCTCGTACCCAT
CCGCAGCCGAATTACCTCAGCTACAAGAGCAACTGGGCATCACCGTCGACCCGACTCAACTTGCTTAA

Protein sequence : 
MTHDITVIGSNMMELTTDIDRMPKLGETVSAPSFHMAFGGKGANQAYAAAQLGSSVAMISKVGSDSLGQAYLEHFQQSGI
DITGVSVGNQSNGVAPCFIQGNMNSIIVVQGANSELTPDVLDQYTDLIKSSKMVILQQEISLATDYRAIDLAEQFHVPVM
LNPAPANDNVDLEHITKCEFYSPNETELGRLTHLPVESIDQIKDAAHSLVDQGVKNVIVTIGSRGALWVCADHEELIPSY
KVNAVDSIGAGDSFVGAFAHYYTNGEDIPTALRHANAYAAVTVTMSGSQTSYPSAAELPQLQEQLGITVDPTQLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoK ADD91722.1 deoxyribokinase DeoK Not tested PAI-I AL862 Protein 3e-58 47
unnamed CAE85173.1 hypothetical protein Not tested PAI V 536 Protein 3e-58 47
ORF4 AAK27331.1 unknown Not tested PAI-I AL862 Protein 1e-52 44