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Name : LAF_1526 (LAF_1526) Accession : YP_001844342.1 Strain : Lactobacillus fermentum IFO 3956 Genome accession: NC_010610 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1722730 - 1725234 bp Length : 2505 bp Strand : - Note : - DNA sequence : ATGGATAACGAAAATCTATACACACCAAGCGCCAATAACGTCTTGCGGATTGCCCAGGAACAGGCGCGCTTTTTTAAACA CCAAGCCGTCGGGACGGAACACCTCCTCTTGGCCTTGAGCCTCGAAAAGGTGGGGGTGGCTGCGACGGTTTTGCACCAGT TTAACGTCACTAGTGACGACCTGCGTGAAGAGATTGAACGCTACACCGGGTACGGAACCATGCAAAACACCGCTAGCGAT GCGTACCTACCTAATTCGCCAAAGTTACGCGAAATTTTGGCCCTGGCAGCCCGCTTGGCCCAACAAATGGGGGCAAGACG TGTGGGTACTGAGCACCTATTGTTGGCCCTGTTGTCAGATGAGACCATCCTTTCCTCGCGGATCCTTTTGAACTTGGACG TGGAACCAAAGCAAGCCCGCCGGATGTTGTTACGGCGTTTGGGGGTTTCTCAAGAGGGACGGCGCAACCGCCGGCAAAAC CAAGCCAATACCCAACCGGAGGAGGGGGAAGGGACTACGCCAACCCTCGATAAGTACGGCCGTGATTTGACAAAGGTGGC CAGGGAAGAAGGGCTTGACCCCGTAATTGGACGGGAAAAAGAAATCAAGCGGGCGATTCAGATCCTCGCCCGGCGGGCCA AGAATAACCCGGTCCTGTTAGGGGAACCGGGGGTCGGAAAGACGGCGATTGTCGAGGGCCTTGCCCAACGGATAGTTAAC GGTGAAGTTCCTAATGAACTAGCCGAAAAGCGCTTGGTGGTCCTGGATATGGGGACCTTGGTTGCCGGTACCAAATTCAG GGGTGAATTCGAGGGGCGGATCAAAAACGTCATCGATGAAGTTTACCGGGACGGCAAAATTATCTTATTTATTGACGAAA TCCACACCATGATTGGTGCCGGGGGAGCAGAGGGGGCGATTGACGCCTCCAACATTCTCAAACCGGCCCTGGCCCGGGGG GAACTCCAGTTGATTGGGGCGACTACCCTGGACGAGTACCAAAAGTACGTTGAAACCGATGCGGCCTTAGAACGGCGTTT TGCGACGATCATGGTTGAAGAGCCAACTAAGGAGCAGACCCGCCAAATCCTCGAGGGAATTCGGCCCCGCTATGAAAAAC ACCACCACGCCAAGATTACTGATGAAGCGCTGATGGCGGCGGTTAACTTGTCGAGTCGTTACATTACCAACCGTTTCTTA CCGGATAAGGCGATTGACCTGATCGATGAGGCCGGGGCAATGGTCCGCATCGATGGTGAAGAAAAGGGGAACCAAAAGAA TGGCTTGACGGTCAAGTTAGAGGAACTCCGGGCACAAAAAGAGGACGCAATTGCCGAGCAAGACTTTGACCGGGCGGCCG ACTTACGCCACGAAGAGCTAACGGTTAAGCGACAAATCGAAGAACAGCGGGAACGAGACGCCCAGTTGGTTGCCGATGGC AAGTTCCTGTACACCGTGACGGCTGAAGACATTGCCAAGGTAGTTAACGAATGGACCGGGGTGCCGTTAACCCAACTCCA AAAGAAGGAAAGCGATCGCTTGGTTAACCTGGAGAGGGTGCTTCACAAACGAGTGATCGGCCAAGACGAAGCCGTTTCGG CGATTGCCCGGGCAATTCGCCGGGCCCGCAGCGGCTTAAAGGACCCGAACCGGCCGATTGGTTCCTTCATGTTCTTAGGA CCAACCGGGGTTGGGAAGACCGAGCTGGCTAAGGCGTTAGCCGAAGCGATGTTTGGCCAAGAAGACAACATGATCCGGAT TGATATGTCCGAGTACATGGAACGCTATTCGACCAGCCGGTTAGTCGGGGCGGCGCCAGGTTACGTCGGCTACGACGAAG GTGGACAGTTGACCGAACAGGTTCGCCAACACCCGTACTCCGTCGTCTTATTAGATGAGGTGGAAAAGGCCCACCCAGAT GTCTTTAACCTCCTGTTACAGGTCTTAGATGATGGGGTTTTGACCGATTCCAAGGGACGTAAGGTTGACTTCCGGAACAC GATTTTGATCATGACCTCCAACTTGGGGGCGACCCAGTTGGCCGATGAAAAGACGGTCGGCTTCGGGGCGACTGGCGTTC AAAATAATTACCAAGCGATGTCGGCGGCCATCAGGCAACAGATGCGCTTGCACTTCCGGCCGGAGTTCTTGAACCGGATT GATGAGACCGTGATCTTCCACTCGTTGACCAAGGAAAATATTCACCAAGTGGTTAAGCTCTTGAGCGCCCAGTTGGTAAA GCGGGTGGCGGAACAAAAGATCAGCCTGAAACTGACCCCGGCTGCCATTGAGTTAGTAGCGGCGAAGGGGTACAACCCTG AATACGGGGCGCGGCCATTACGGCGGGCCTTACAAACGATGGTGGAAGACCCGCTCTCCTTATCGATGATTGATGGCCAA GTTGCGGCCGGTGATCAAGTGACGATTGGTGCCCAACGGGGGAAATTGAGCTTCAAAGTCAAAACTTCTGACAACGCTTC CCGGAACCTAGTTCTCCAAAATTAA Protein sequence : MDNENLYTPSANNVLRIAQEQARFFKHQAVGTEHLLLALSLEKVGVAATVLHQFNVTSDDLREEIERYTGYGTMQNTASD AYLPNSPKLREILALAARLAQQMGARRVGTEHLLLALLSDETILSSRILLNLDVEPKQARRMLLRRLGVSQEGRRNRRQN QANTQPEEGEGTTPTLDKYGRDLTKVAREEGLDPVIGREKEIKRAIQILARRAKNNPVLLGEPGVGKTAIVEGLAQRIVN GEVPNELAEKRLVVLDMGTLVAGTKFRGEFEGRIKNVIDEVYRDGKIILFIDEIHTMIGAGGAEGAIDASNILKPALARG ELQLIGATTLDEYQKYVETDAALERRFATIMVEEPTKEQTRQILEGIRPRYEKHHHAKITDEALMAAVNLSSRYITNRFL PDKAIDLIDEAGAMVRIDGEEKGNQKNGLTVKLEELRAQKEDAIAEQDFDRAADLRHEELTVKRQIEEQRERDAQLVADG KFLYTVTAEDIAKVVNEWTGVPLTQLQKKESDRLVNLERVLHKRVIGQDEAVSAIARAIRRARSGLKDPNRPIGSFMFLG PTGVGKTELAKALAEAMFGQEDNMIRIDMSEYMERYSTSRLVGAAPGYVGYDEGGQLTEQVRQHPYSVVLLDEVEKAHPD VFNLLLQVLDDGVLTDSKGRKVDFRNTILIMTSNLGATQLADEKTVGFGATGVQNNYQAMSAAIRQQMRLHFRPEFLNRI DETVIFHSLTKENIHQVVKLLSAQLVKRVAEQKISLKLTPAAIELVAAKGYNPEYGARPLRRALQTMVEDPLSLSMIDGQ VAAGDQVTIGAQRGKLSFKVKTSDNASRNLVLQN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-176 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LAF_1526 | YP_001844342.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 0.0 | 55 |
| LAF_1526 | YP_001844342.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 7e-143 | 50 |
