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Name : LAF_1388 (LAF_1388) Accession : YP_001844204.1 Strain : Lactobacillus fermentum IFO 3956 Genome accession: NC_010610 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1571767 - 1574013 bp Length : 2247 bp Strand : + Note : - DNA sequence : ATGCTCTGTCAAGTTTGTCAACAAAACCAAGCCACGATTCATCTCCAAATGATGATGAACGGGCAAAAAATGCAAATCGA CTTATGTCAGGATTGCTACCAAAAAATGCAAAACATGCAAATGAACCTGTTGAACGGGGGCAGTGATATGAATAATGGAT TCGGCTTTGGGAGTCTGGAAGACTTCATGAACGCCATGAACAACATGCAAAACCAACAAGCCAATAACAACAACGAAGGC CAACAAGCCAACCTAAATCAAAACCAACGCCAAGGCGGCGGCCGCGGCAACGGCAAGGGACTGTTAGCCCAGTTCGGGAT TAACATGACCGAGCTGGCCCGCCAAGGCAAGATCGACCCGGTAATCGGCCGCGATAAGGAAATCGCCCGGGTCGTCGAAA TCTTAAACCGGCGGACCAAGAACAACCCGGTCCTGATCGGGGAAGCCGGGGTTGGTAAGACCGCCGTTGTCGAAGGGCTG GCCCAAGCCATCGTTTCCGGTCAGGTACCAGAAAAGCTAGCTAATAAGGAAGTTATTCGCTTAGACGTCGTCTCCCTGGT CCAAGGAACCGGAATCCGCGGTCAGTTTGAACAGCGGATGCAACAGTTGATCCAAGAGGTTTCTAAGGACGAAAACGTGA TCCTCTTCATCGACGAAATCCACGAAATTATGGGTGCCGGCAACGCTGAGGGCGGCATGGACGCCGGTAACGTCTTGAAG CCGGCCTTGGCCCGGGGTGAGTTCCAACTGATCGGGGCCACCACCCTCAACGAATACCGCAAGATCGAAAAGGACGCCGC TTTGGCCCGGCGGTTCCAACCGGTCGAAGTTGAACAACCGTCCGTCGACGAAACGATCCAGATCCTAAACGGGATCAAGG GCCGCTACCAGGATTACCACCACGTTACCTACACTAACGACGCCATCGAGGCGGCCGCTAAGCTATCCGATCGCTACATC CAGGACCGCTTCTTGCCGGACAAGGCGATCGACCTCTTGGACGAAGCCGGTTCACGCAAGAACCTAACCTTAAAGACCGC CGACCCGCACACTATCGAAAATGAGATTCACACCGCCGAAGCCCACAAGCAACAGGCCGTTGAATCACAAGACTACGAAA AGGCCGCCTTCTACCGCGACCAGGTTTCTAGGTTGACCAAGGCCAAGAAGGACGCCGAGGAAAACCACACCGACCAAGCC GCCACGGTCACGGCCGCCGACATGCAAAAGATCGTCGAAGAGATGACCAACATCCCGGTCAGCGACCTGCAAAAACAAGA GCAAAACCAACTCAAGAACCTCGATAAGCAGCTCGAAGACCACGTCATCGGCCAAAACGAAGCCGTTGACAAGATCGCCC GCGCCATTCGCCGGAACCGGATTGGTTTAAACAAGTCCGGCCGGCCAATCGGCTCCTTCCTCTTCGTCGGGCCAACCGGG GTTGGGAAGACCGAAACCGCTAAGCAACTGTCTAAGCTGCTCTTTGGTTCCAAGGACGCCATGATCCGCTTTGACATGTC CGAATACATGGATAAGACCTCAACTTCCAAGTTGATTGGGGCCGCCCCAGGTTACGTCGGTTACGAAGAGGCCGGCCAGT TGACCGAACAAGTTCGCCGCCACCCGTACAGCCTGATCCTTTTGGATGAGGTGGAAAAGGCCCACCCAGACGTCATGCAC ATGTTCTTACAGATCCTCGACGACGGCCGCTTGACCGATTCGCAAGGGCGGACGGTTTCCTTTAAGGACACGATCATCAT CATGACCTCGAACGCCGGGACTGGTGACATGGTCGCCTCCGTCGGCTTTGGCGCCGAGGCGGCCGGCCAAACCAAGTCGG TCATCTCCAAGCTGACCAACTACTTCAAGCCGGAATTCTTGAACCGGTTCGATGACATCGTGGAATTCAACGCCCTGACC AAGGACGACTTAATGAAGATTGTCGGCCTGATGATCGACGACGTTAACAACATGTTAGCCGACCGCAAGCTCCACATCGA AGTGCCAGACGCCGTTAAGGAACGCTTAGTTGACCTCGGTTTTGACCCGAAGATGGGGGCCCGGCCACTGCGGCGGGTCA TCCAAGAACACATCGAAGACCAAATCGCCGATTACGTCCTCGACCACCCGGACGCTACCAACCTGGTGGCCCAAGTCGAT GAAGCCGGCAAGATCACCGTGGCCGCCACGCAAAAGGCGATCGCCGCACCAATGGACGCCGCCACCGACGCTAAGACGGA AGAATAA Protein sequence : MLCQVCQQNQATIHLQMMMNGQKMQIDLCQDCYQKMQNMQMNLLNGGSDMNNGFGFGSLEDFMNAMNNMQNQQANNNNEG QQANLNQNQRQGGGRGNGKGLLAQFGINMTELARQGKIDPVIGRDKEIARVVEILNRRTKNNPVLIGEAGVGKTAVVEGL AQAIVSGQVPEKLANKEVIRLDVVSLVQGTGIRGQFEQRMQQLIQEVSKDENVILFIDEIHEIMGAGNAEGGMDAGNVLK PALARGEFQLIGATTLNEYRKIEKDAALARRFQPVEVEQPSVDETIQILNGIKGRYQDYHHVTYTNDAIEAAAKLSDRYI QDRFLPDKAIDLLDEAGSRKNLTLKTADPHTIENEIHTAEAHKQQAVESQDYEKAAFYRDQVSRLTKAKKDAEENHTDQA ATVTAADMQKIVEEMTNIPVSDLQKQEQNQLKNLDKQLEDHVIGQNEAVDKIARAIRRNRIGLNKSGRPIGSFLFVGPTG VGKTETAKQLSKLLFGSKDAMIRFDMSEYMDKTSTSKLIGAAPGYVGYEEAGQLTEQVRRHPYSLILLDEVEKAHPDVMH MFLQILDDGRLTDSQGRTVSFKDTIIIMTSNAGTGDMVASVGFGAEAAGQTKSVISKLTNYFKPEFLNRFDDIVEFNALT KDDLMKIVGLMIDDVNNMLADRKLHIEVPDAVKERLVDLGFDPKMGARPLRRVIQEHIEDQIADYVLDHPDATNLVAQVD EAGKITVAATQKAIAAPMDAATDAKTEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-152 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LAF_1388 | YP_001844204.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 0.0 | 57 |
| LAF_1388 | YP_001844204.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 3e-155 | 52 |
