Gene Information

Name : LAF_1044 (LAF_1044)
Accession : YP_001843860.1
Strain : Lactobacillus fermentum IFO 3956
Genome accession: NC_010610
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 1214754 - 1215677 bp
Length : 924 bp
Strand : -
Note : -

DNA sequence :
ATGAGCACCACTATTTTATCATTTCAGAACCGTGTTGTCATTGAAACGCTTCATAATGAAGGACGTTCCTTGCGATACAT
CGCTAACTACTTAGGCTTTAGTAAGACCACCATCTTTAACGAACTTCACCGGCTAAATAGTGAGTACCAGGCTGGGCTAG
CGCAAACTGACTTTGAACGCAAGGTTAGTCAACGGGGGCGGAAGTCTTCGCTCACTAAAAACCTTAAACACTTGATCGAG
GAAAAAATTCAAGTCCAGAAGTGGTCCCCTGAACAAGTTGCCCATGTAGTTGGGATTGCCTACAAGACGGTCTATAACTG
GATTGATCAAGGCTGGCTTGATGTACAGTTACCCGATTTGCCTGATCATGGAATTCGTCGTCATCGTGCTAAAGAAAAGC
GTGGTACGTTCAATCACGGCCGCTCCATTGAGGAGCGTCCTCATAAAGTCGAAACTCGCCAGGAATTCGGCCACTTTGAA
GCTGATACCGTACTTTCTGGTAAACGTAAAGGTCAAGCTGTGGCTACTTTTGTGGAGCGTAAGAGTCGCCTGACAATTGT
TAAACGGCTCCATGGTCGCGACAGTCAGTCCATGACTCAAGCCGTACTTGAACTAGCTAGTCAACTTCAAGACAAGCTCA
AGACGCTTACTGTGGATCATGGTAAAGAGTTCGCTAACTACCAGACAATTGAACAGCTAACAGGTACTCAGGTTTATTTT
GCCCATGCTTATTCACCACATGAACGCGGTAGTAATGAGAACCGTAACCGAGTTTTGCGACGATTTATTCCCAAGGGACA
AGCCATTGAAGAGCTGAGCGATCGCCAGCTGCTTCAAATCAATTGGTATCTGAATTCCCGACCACTTAAATGTCTTAACT
GGCACACACCAATCGAGATCTTCTTGCTTAATCTACGTCACTAA

Protein sequence :
MSTTILSFQNRVVIETLHNEGRSLRYIANYLGFSKTTIFNELHRLNSEYQAGLAQTDFERKVSQRGRKSSLTKNLKHLIE
EKIQVQKWSPEQVAHVVGIAYKTVYNWIDQGWLDVQLPDLPDHGIRRHRAKEKRGTFNHGRSIEERPHKVETRQEFGHFE
ADTVLSGKRKGQAVATFVERKSRLTIVKRLHGRDSQSMTQAVLELASQLQDKLKTLTVDHGKEFANYQTIEQLTGTQVYF
AHAYSPHERGSNENRNRVLRRFIPKGQAIEELSDRQLLQINWYLNSRPLKCLNWHTPIEIFLLNLRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAC67550.1 putative transposase Not tested Type-IVc SCCmec Protein 2e-42 41
SAR0085 YP_039551.1 transposase Not tested Type-II SCCmec Protein 3e-42 41