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Name : LAF_1015 (LAF_1015) Accession : YP_001843831.1 Strain : Lactobacillus fermentum IFO 3956 Genome accession: NC_010610 Putative virulence/resistance : Unknown Product : succinyl-diaminopimelate desuccinylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0624 EC number : - Position : 1173330 - 1174481 bp Length : 1152 bp Strand : - Note : - DNA sequence : ATGGATCAAGCGCACGCAGAGGAGATTTTAAAAAAGGTGATCGCCATTCCAACCGTGAATGATAATGAAAAAGAGGTCGC CGATTACTTAGCGAGTCTCTTTGCCCCTTACGAAGATCAGGGGGTTACGATTGAGGAGTTGGCATATTCACCCGGCCGCA GCAATTTGATTGTCACGATTGGGGAGGGGGAGACCACGTTAGGCTTTTCCGGGCACCAAGACGTCGTGGACCCCGGTGAC CTGGCTGATTGGGACACCGACCCCTTTGTACCGACCATCAAGGAGGGGCGCCTGATTGGGCGTGGTGCTTCGGACATGAA GAGTGGCTTGGCGGCGGTTGTCTGCGCGATGCTGGCCATGCTGGAAGAAAAGAAGGTCCCGGGCAAGATCAAGTTAATCG CCACGGTCGGTGAAGAATCCGGCGAATACGGGGCGGCGCAAGTCACCGATGCCGGGCTCGCCGACGACCTGAGTGCGTTG GTGATCGCCGAACCGACCGACGGAATGCGGCAAATTTGCTACACCAGCAAGGGCGTCGTGGACTACCACGTTACCTCCAA GGGAATCGCCGCCCACTCTTCTAGGCCCCACGAGGGTGAAGATGCAATCGCCCACCTCTTGGAGTTTGCCAATGAGGTTC AAGCCCGCCTAGCCCGCTTGGATAAAAAGGATCCGGTACTCGGGAAACTTACCAGTTTGATTACCCTGATTAAGGGCGGT GAACAGATTAATTCCGTCCCGTCCCAAGCCGAGCTCTCTGGCAACATCCGGACGATCCCGGATTACACTAACCAGGTGAT CTTTGATGTGATCGATGGCTTGATCGCCGAATTAAACGCCAAGCCGGGCTACCAGCTCAGCGTCGATTACATTTACCCCG AGGAACCGATGCCCGGCGACGCCCACTCCCCGCTGGTTCAACTACTTCAAAAGGTTGGCCTGGAGGTCTTTGGTCACACC TTGACCCCGGTCGGTGGAACCGGGGCTAGTGACGGCTCCGAGTTCGTTCGGGCCAAGGGTGACTACCCAATCGTGATGGT CGGCCCCGGCAGTGACAGTCAGCACCAGCCTAACGAATGGGTCAGCCTCGCCGCCTATCACCAGGCGATTGCCTTCTACC AACAGTTCGCTAATGAATTCTTCGGCAAGTAA Protein sequence : MDQAHAEEILKKVIAIPTVNDNEKEVADYLASLFAPYEDQGVTIEELAYSPGRSNLIVTIGEGETTLGFSGHQDVVDPGD LADWDTDPFVPTIKEGRLIGRGASDMKSGLAAVVCAMLAMLEEKKVPGKIKLIATVGEESGEYGAAQVTDAGLADDLSAL VIAEPTDGMRQICYTSKGVVDYHVTSKGIAAHSSRPHEGEDAIAHLLEFANEVQARLARLDKKDPVLGKLTSLITLIKGG EQINSVPSQAELSGNIRTIPDYTNQVIFDVIDGLIAELNAKPGYQLSVDYIYPEEPMPGDAHSPLVQLLQKVGLEVFGHT LTPVGGTGASDGSEFVRAKGDYPIVMVGPGSDSQHQPNEWVSLAAYHQAIAFYQQFANEFFGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 2e-67 | 42 |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 5e-68 | 42 |
