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Name : LAR_0819 (LAR_0819) Accession : YP_001841815.1 Strain : Lactobacillus reuteri JCM 1112 Genome accession: NC_010609 Putative virulence/resistance : Unknown Product : type I restriction-modification system restriction subnit Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 933668 - 936793 bp Length : 3126 bp Strand : + Note : - DNA sequence : GTGGCAAGTTATCTTAACGAAGAAAATATAGAGGGCATTGCTTTAAGATGTCTTGATGAAGTAGGCTATCAAGTCTACAA AAGTGCTAGTTATACTAGTCCGAATGTAGAAATAGATGCTGAAAGAAATAATGACCATACACAACCTATTTTAAAAGGAC AATTAGAAAACGCTTTACGCAAGTTAAATTCTGGACTTGATGATGAAGTATACCGTAATGCCATTCATCAATTTGAAATG CTAGCAGATAGCCCAGATATGATGCTTAATAACCATAAACTTCATGAATTAATTATCGGCGGAGCAAAAGTAAAAACATC AATTAAAGGTGAGGACCGGACCATTACTTTGTATCCGATTGATTTTAAAAACGTTGATAACAATACATTTATTGCAACAA ATCAATTTACAATGAAACAAGGAGAACATGAAAGAAGACCAGACATTACTCTTTTTATTAATGGGCTTCCTTTAGTTACC TTTGAATTAAAGAACCCAGCAAATGCGAATGTAGGTATTCAACAAGCTTTTGCCCAATTTTCTACTTATAAAGAAGAAAT ATCTTCTTATATGCAATATAACGAAATTTTAATTGTTTCTGATGGAATTAATGCGCGAGCTGGGTCATTAACAGCGGGAA TTGATCGCTTTATGCGGTGGCGCGAGCCGAAAAATGTAGATATTGACGATTCAATGATGGAATTAGAAGTATTGATAAAA TACATGCTTACCCCATCTGATTTATTAAACATCATTCAGAATTTTATTCTTTTTGAAAGTGATGGAGACAAGACAATCAA GATTTTAGCAGCATATCATCAATACTATATGGTTAATAAAGCTGTAAAAAGAACATCAAAAGTATTGGCTGACCCTGATG ACAAACGAATTGGTGTTGTTTGGCATACCACTGGTTCTGGTAAATCATTGTCGATGGTCTTTTATTCTGGAATAGTAGCT CGTAAACTTGGTAATCCAACTATTTTAGTAATTAATGATCGTAATGATTTAGATGATCAGTTATTTGGTACTTTTGCGGC TGCTCATGAATATCTACAACAAAACCCTGATCACGCTGAATCACGAGGAGAAGTTCGTAAATACATGAGTAAGAATTCTG GCGGGATTGTTTTTAGTACAATTCAAAAATTCTCACCAAACTTTGACGCAGGTGAAGAACATATGCCTATACTTACAAAC CGTTCTAACGTTATCGTAATGGTTGATGAAGCTCATCGGTCTCAATATGGAATGCAAGCAAAACTAACCGATAATGGTAT TCGTTATGGATATGCTAAATATTTGCGTGAGGCTCTTCCTAACGCCTCGTTTATTGGTTTTACAGGAACACCAATAAATA CTGAAGATAAATCTACCGTGGCAATGTTTGGAAATTACATTGATGTTTATGATATTACTCAAGCAGTTAATGATCATGCC ACGGTCCGGATTTATTATGAAAGTCACGTTTTCCCATTAAAGCTTAAGGACAATGCAATTGATGAATATCAAAAGTTAAT TAAAGAAGCTGGTATTAATGACGATCCTAATCTTAGAGAAACTGAGCGACGGAATCGGGCATTTACTAGATTAGAGGCCC TTGCCGGTGCAAAACCACGGTTAGAAAAAATAGCCCAACACTTTGTTCATCATTTTGAATCACGACAAAAGGAAGAATTT GGTAAGTCGATGATTGTTGAAATGTCACGACAAAATGCAGTAAAGCTATATAATGAAATTGCAAAATTACGTCCTGAGTG GATAAATGATGATATTCATAAGGGAAAAATCAAAGTTATTATGACGTCTAATGCTTCTGATGGCCCAGAATTTGCTAAAT TTAAGACAAGCAAACAAGACCGATTTACGTTACAACAACGGATGAAAGATAACGATGACGAATTACAAATTGTAATAGTT GTTGATATGTGGCTAACTGGATTTGATGTTCCTAGCATGAATACCATGTACATTGACAAGCCAATGCAAGGACATAATCT TATCCAGGCAATTGCTCGTGTTAATCGAGTATTTAAGAATAAAGATAGTGGGTTAATTGTCGATTACATTGGGATTGCTG ATGCTCTTCGTTTTGCCTTAAATGTATACACAAAAGATGACCAAGGAAAAGTTGGAATTAATGTTGATCGTGCACTAATG CTTCTAAAAGAGAAATATGACATTATTAAAGAAGATTTCCTATATGGGATTGATTACTCAGAATTTGATTCTGATGATAG CCAAACTCGTCAGAAGGCAGTTACTCGTGTTGTAAATGAATTAGCTGCAGAGGACGATGAAACAAAACAAAAATTCTTTG ATGTAGTAACAGAACTTCAAAAAGCTTATGCATTAGTTTCAACACAGCCGGAAGCCCAAGATTTAAGTGCGGAGATAGCA TTCTTTAAAACGGTTAAAGTATTCTTAACTAAGCTTGAGGCTCCTGACGATCCAGATGATAGTAAAGAGATTCATAGTTC TGTTGATTATCGAATGCAACAACTATTAGATCAATCAATTATTTCAGAGCCGAACGTTGACATTTATCGTGACCTAGGAT TAGAACGCCCTAACTTAGATTTAATCTCAGAACAATTTCTTGAAAAAGTAAATGAAATTACTGAGAAAGATCTAGCAATT ACTCTTTTAGAGAAACTATTAAAAGGGCAAGTAAAAGCCTACCAAAAAACGAATATTGTTAAAGGCAAGAAGTTTGAGGA ATTACTTCAAGAGTCAATTGATGATTACAATAGGCGGGGAATTACCAGTGAAATTGTAATTAGAAAGTTAATTGATATGG CTAAGGAAATTAATAAAGAACAACAAGAAGGTAAGAATCTGGGACTTTCAAAAGAAGAAGTTGCCTTTTATGATGCTTTA GCTGATCATGAGAAAGCTGTTCAAGAATTAGGAGAAGAAAAGTTACATCTTATTGCTGCTGAATTAGTAAAGACTGTAAA GCAACAATCAGGGGTTGATTGGGAGCGGCGCAGCAATGTTCGTGCTAAAATGCGTGTTGCAGTTAAACATCTATTACGTA AGTATGGTTATCCACCTGATATTGCTCCAGATGCCATTAAGACCGTAGTAAAGCAAGCTGAACAAATGGCTTCTCAAGAG AGCTAA Protein sequence : MASYLNEENIEGIALRCLDEVGYQVYKSASYTSPNVEIDAERNNDHTQPILKGQLENALRKLNSGLDDEVYRNAIHQFEM LADSPDMMLNNHKLHELIIGGAKVKTSIKGEDRTITLYPIDFKNVDNNTFIATNQFTMKQGEHERRPDITLFINGLPLVT FELKNPANANVGIQQAFAQFSTYKEEISSYMQYNEILIVSDGINARAGSLTAGIDRFMRWREPKNVDIDDSMMELEVLIK YMLTPSDLLNIIQNFILFESDGDKTIKILAAYHQYYMVNKAVKRTSKVLADPDDKRIGVVWHTTGSGKSLSMVFYSGIVA RKLGNPTILVINDRNDLDDQLFGTFAAAHEYLQQNPDHAESRGEVRKYMSKNSGGIVFSTIQKFSPNFDAGEEHMPILTN RSNVIVMVDEAHRSQYGMQAKLTDNGIRYGYAKYLREALPNASFIGFTGTPINTEDKSTVAMFGNYIDVYDITQAVNDHA TVRIYYESHVFPLKLKDNAIDEYQKLIKEAGINDDPNLRETERRNRAFTRLEALAGAKPRLEKIAQHFVHHFESRQKEEF GKSMIVEMSRQNAVKLYNEIAKLRPEWINDDIHKGKIKVIMTSNASDGPEFAKFKTSKQDRFTLQQRMKDNDDELQIVIV VDMWLTGFDVPSMNTMYIDKPMQGHNLIQAIARVNRVFKNKDSGLIVDYIGIADALRFALNVYTKDDQGKVGINVDRALM LLKEKYDIIKEDFLYGIDYSEFDSDDSQTRQKAVTRVVNELAAEDDETKQKFFDVVTELQKAYALVSTQPEAQDLSAEIA FFKTVKVFLTKLEAPDDPDDSKEIHSSVDYRMQQLLDQSIISEPNVDIYRDLGLERPNLDLISEQFLEKVNEITEKDLAI TLLEKLLKGQVKAYQKTNIVKGKKFEELLQESIDDYNRRGITSEIVIRKLIDMAKEINKEQQEGKNLGLSKEEVAFYDAL ADHEKAVQELGEEKLHLIAAELVKTVKQQSGVDWERRSNVRAKMRVAVKHLLRKYGYPPDIAPDAIKTVVKQAEQMASQE S |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 49 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 49 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 49 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 43 |
