|
Name : LAR_0816 (LAR_0816) Accession : YP_001841812.1 Strain : Lactobacillus reuteri JCM 1112 Genome accession: NC_010609 Putative virulence/resistance : Unknown Product : type I restriction system DNA methylase Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : - Position : 928800 - 930332 bp Length : 1533 bp Strand : + Note : - DNA sequence : TTGGCAACAAAGTCTAAAGAGCTAAATATTGAAGATAAATTATGGAAGGCTGCTGATGCATTGCGTGGAAGTATGGATGC ATCAGAATATCGTAATGTTGTATTAGGATTGATCTTTCTTAAATATGCGTCAGATTCCTTTGAAGAAAGAAGACAAGAAC TTTTAAAAACAGAATATCCTGAAGATGCAGAAGATCCGGATATGTATCTAGAAAATAATATTTTCTGGGTTCCTCAAGAG GCTCGTTGGGCAAAGATTGAACATGCTGCTAAAACACCTCAAATTGGTGAAGTGATTGATGATGCAATGACTGCAATTGA AAAGAGCAATGATTCATTTCGAGGGATTTTGAGTAAAAACTATGCTTCACCAGATCTTGATAAAACACGCTTGGGTGAAG TAGTTGATTTAATTTCGGACATTAAGGTTGGAACTAAAGAATCTACAGATAAAGATGTTTTAGGTCGTGTTTACGAATAT TTCTTAAATGAATTTGCTAGTCAAGAGGGTAAACACGGTGGTGAGTTCTATACACCACGGTCAATTGTTAAAATCTTAGT TGAAATGATTGAGCCTTATAAAGGACGTATTTATGATCCTTGTTGTGGTTCAGGTGGAATGTTTGTCCAATCAGAAGAGT TCGTTCGTCATCATCAGGGAGAGTTGAAAGATCTTCACGTATTTGGTGAGGAATCTAACCCAACTACTTGGAAATTAGCT AAGATGAATTTAGCGATTAGAGGAATTGATAGCGACTTAGGCCCCCACCAAGGCGACACTTTCACTAATGATTTACATAA AGGTGTTCGTTTCAACTACATTTTGGCTAATCCACCATTCAACATTAAAAACTGGGGTGGCGAAAAGCTTCAAGAAGATG CTAGATGGAAATATGGTGTTCCACCAACAGGAAATGCAAATTATGCCTGGATTGAACATATTATTAGTAAGTTAGCACCG GATGGGAAAGCTGGCTTTGTTTTAGCTAACGGTGCCTTATCGACTTCTAATAAAGAAGAGTTTGCTATTCGTAAAGCAAT TTTAGAAGATGATAAGATTGATGCAATTGTTGCTTTACCTGAAAAAATGTTTTATTCAACGGGGATTCCAGTTTCATTAT GGTTTGTTGATATGAATAAGGAATCTGAGGATGAACGCTCGCGAAAGGGTGAGACATTATTTATTGATGCACGTAATTTG GGTGAGATGATTGATCGAACTCATCGTGCATTTAATGATGATGATATTAAAAAAGTAGCGGATACTTACCATGCTTATCG TGGTACAAACGATCAAGAATATAAAGATGTTGCTGGCTTTTGTAAAATTGCTAAGTTAGATGAGATCGCTAAAAATGATT ATGTATTAACGCCTGGTCGCTATGTTGGCCTTGCTAAACAAGAAGATGATGGAGAATCATACGAAGTTAAAATGAAGAGA CTAACTAGTGAATTAAAAGAACAATTTGAGGAGAGTAATAAGTTACAAGCTCAAATTAAAGATGTATTGAAGGAGCTTGG ATATGAAATATAA Protein sequence : MATKSKELNIEDKLWKAADALRGSMDASEYRNVVLGLIFLKYASDSFEERRQELLKTEYPEDAEDPDMYLENNIFWVPQE ARWAKIEHAAKTPQIGEVIDDAMTAIEKSNDSFRGILSKNYASPDLDKTRLGEVVDLISDIKVGTKESTDKDVLGRVYEY FLNEFASQEGKHGGEFYTPRSIVKILVEMIEPYKGRIYDPCCGSGGMFVQSEEFVRHHQGELKDLHVFGEESNPTTWKLA KMNLAIRGIDSDLGPHQGDTFTNDLHKGVRFNYILANPPFNIKNWGGEKLQEDARWKYGVPPTGNANYAWIEHIISKLAP DGKAGFVLANGALSTSNKEEFAIRKAILEDDKIDAIVALPEKMFYSTGIPVSLWFVDMNKESEDERSRKGETLFIDARNL GEMIDRTHRAFNDDDIKKVADTYHAYRGTNDQEYKDVAGFCKIAKLDEIAKNDYVLTPGRYVGLAKQEDDGESYEVKMKR LTSELKEQFEESNKLQAQIKDVLKELGYEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 4e-167 | 64 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 4e-167 | 64 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 2e-167 | 64 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 7e-116 | 45 |
