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Name : LAR_0043 (LAR_0043) Accession : YP_001841039.1 Strain : Lactobacillus reuteri JCM 1112 Genome accession: NC_010609 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 47316 - 49553 bp Length : 2238 bp Strand : + Note : - DNA sequence : ATGGCTCAAAACCCAATGAATCCATTTGACAACGACATGAATGACATCTTTAATCAATTAATGGGTGGCATGAATGGTTT CAATTCTGATAATCGGCGTTACCTAATCAATGGTCGTGAAGTAACACCAGAAGAATTTGCTGAATATCGTAGAACTGGTC AATTGCCAGGCGGTGCAAATCCTCAACAAGGTGGGCAACCTGGCCCTCAACCTAACGCAGGTAAGGACAGTATCTTACAC AAGTTAGGTCGAAACTTAACTCAAGAAGCTCGTGAACATGAACTTGACCCTGTTATTGGTCGGAACAAGGAAATCCAAGA AACAGCTGAAATTTTAAGCCGGCGGACAAAGAACAACCCTGTATTAGTTGGGGATGCTGGTGTTGGTAAGACTGCTGTTG TTGAAGGTTTAGCACAAGCAATTGTTTCCGGCGATGTACCAGCTGCTATCAAGGACAAGGAAATTATCAGTATCGATATT TCTGGCCTTGAAGCAGGTACTCAATATCGTGGTAGTTTTGAAGAAAACATGCAAAAGTTGGTTGATGAAGTCAAGAAGGC TGGAAATATCATCCTCTTCTTCGATGAAATTCACCAAATTATTGGTGCCGGTTCAACTGGTGATTCTAGTGGTTCCAAGG GTATGTCTGACATTATTAAGCCAGCATTATCCCGTGGTGAACTAACAGTTATCGGTGCAACTACTCAAGATGAATACCGG AACACTATTATGAAGGATGCTGCATTAGCACGGCGGTTCAATTCTGTTACTGTTAATGCTCCAAGCAAGGCTGATACAGT GGCCATCCTTAAAGGTATCCGTGACTTGTACGAACGTCACCACAATGTAAAGTTACCAGATGACGTTCTCCAAGCTGCTG TTGATTACTCTGTTCAATACATGCCACAACGCGCATTACCTGACAAGGCTATCGACTTAATCGATATGACCGCTGCTCAC TTAGCAGCAAAGCACCCAGCACGTGATGCTAAGGCAATTGAAAAAGATATCGAAGCAGAAGAAAAGAAGCAAAAAGCGGC TGCTAAGAAAGAAGATTACAAGGCTGCCCAAGATGCCAAGGAAAAGATTGCTGACTTGAAGAAGCAATTGAGTGAAAACT CTGAATCTGAAAAGGTTACTGCTACTCCAGAAGACGTTGCTAAGGCTGTAGAACAAATGACTGGTATTCCTGTTTCTAAG ATTGGTGCTAGTGACGTTGAACGCTTAAAGGACATGGACAAGCGGCTTGAAGGTAAGGTTATTGGCCAAGACAAAGCTGT TGAAGCAGTTGCTCGTGCTATTCGTCGTAACCGTGCTGGATTTGACGAAGGCGATTCACCAATTGGTAGTTTCCTCTTCG TTGGACCTACTGGTGTTGGTAAGACTGAACTTGCTAAGCAACTAGCCCTTGATATGTTTGGTAGCAAGGATGACATTATT CGGTTAGATATGTCTGAATACTCTGACCGGACAGCCGTATCTAAGATGATCGGTGCTACTGCTGGTTATGTTGGTTACGA AGACAACGGTAATACCTTGACTGAAAAGGTTCGTCGTCACCCTTATTCAATTATTCTTCTTGATGAAATTGAAAAGGCTA ATCCACAAGTTATCACCCTCTTGCTTCAAGTACTTGATGATGGTCGGTTAACTGATGGACAAGGTAACACTATTGACTTT AAGAATACTGTTATCATTGCTACATCAAATGCCGGCTACTCCAACGATGCTCCAGTTAAGATGGGCCGGAACGAAGATGA AGAAGACTTAATTAAGAAGTTGACTACTTACTTCCGTCCTGAATTCTTGAACCGGTTCAACGCTATTGTTGAATTCCACA GCTTGACTAAGGAAGACTTGAAGCAAATCGTTGACTTAATGCTTGCTGAAGTTAACCGGACATTGGCTAAGAAGGGCATG GATGTTAAGGTTACTGATACTGCAAAGCAATACCTTATTGATGAAGGTTACGATGAAGCCATGGGTGCTCGTCCTCTTCG TCGGGTTATCGAACGTGAAATCCGTGATAAGGTAACTGATTACTACCTTGACCACCTCGATGCAAAGAATCTTGTTGCTG AAATGAAGGATGGCCAACTTGTAATTGTTGACGCTAAGGACGCCTCAAAAGACGATAGTAAAGAATATACTTCACCATCT GAAAAGAAGGATGAAGAAAAAGACGATAAGAAGGAAGAAGACAAGAAGTCTGACGAAGATAAGAAAGACGAAAAGTAA Protein sequence : MAQNPMNPFDNDMNDIFNQLMGGMNGFNSDNRRYLINGREVTPEEFAEYRRTGQLPGGANPQQGGQPGPQPNAGKDSILH KLGRNLTQEAREHELDPVIGRNKEIQETAEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVSGDVPAAIKDKEIISIDI SGLEAGTQYRGSFEENMQKLVDEVKKAGNIILFFDEIHQIIGAGSTGDSSGSKGMSDIIKPALSRGELTVIGATTQDEYR NTIMKDAALARRFNSVTVNAPSKADTVAILKGIRDLYERHHNVKLPDDVLQAAVDYSVQYMPQRALPDKAIDLIDMTAAH LAAKHPARDAKAIEKDIEAEEKKQKAAAKKEDYKAAQDAKEKIADLKKQLSENSESEKVTATPEDVAKAVEQMTGIPVSK IGASDVERLKDMDKRLEGKVIGQDKAVEAVARAIRRNRAGFDEGDSPIGSFLFVGPTGVGKTELAKQLALDMFGSKDDII RLDMSEYSDRTAVSKMIGATAGYVGYEDNGNTLTEKVRRHPYSIILLDEIEKANPQVITLLLQVLDDGRLTDGQGNTIDF KNTVIIATSNAGYSNDAPVKMGRNEDEEDLIKKLTTYFRPEFLNRFNAIVEFHSLTKEDLKQIVDLMLAEVNRTLAKKGM DVKVTDTAKQYLIDEGYDEAMGARPLRRVIEREIRDKVTDYYLDHLDAKNLVAEMKDGQLVIVDAKDASKDDSKEYTSPS EKKDEEKDDKKEEDKKSDEDKKDEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-125 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LAR_0043 | YP_001841039.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 4e-140 | 49 |
| LAR_0043 | YP_001841039.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 6e-133 | 48 |
