Gene Information

Name : LAR_0417 (LAR_0417)
Accession : YP_001841413.1
Strain : Lactobacillus reuteri JCM 1112
Genome accession: NC_010609
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 484793 - 485251 bp
Length : 459 bp
Strand : -
Note : -

DNA sequence :
ATGGCTAATAAATTAAATAGCTTAGCCCATACGAAGTGGTTATGTAAGTATCACATCGTATTCATACCAAAGTATAGACG
TAAAGCGATCTTCAATCAATACCGAAGAGACCTAAGAGATTATATTCGTTTATTGTGCAAATATAAGGGAGTAGAAATAA
TTGAAGGTCATATGATGCCAGATCATGTGCACTTGTTAGTAAGTATTTCGCCGAAACTAAGTGTATCGCAGTTTATGGGA
TACTTAAAAGGGAAAAGTGCATTAATGATGTTTGATCGACATGCAAACTTAAAATACAAATATGGGAACCGACATTTTTG
GGCTGAAGGCTACTATGTGAGTACAGTTGGATTAAATGAATCCACGATAAAGAAGTATATCCGAGATCAAGAGAAACATG
ATATAGCAATGGATAAGCTAACAAGTGTGGAATATTCGGACCCTTTTAAGGGTAAGTGA

Protein sequence :
MANKLNSLAHTKWLCKYHIVFIPKYRRKAIFNQYRRDLRDYIRLLCKYKGVEIIEGHMMPDHVHLLVSISPKLSVSQFMG
YLKGKSALMMFDRHANLKYKYGNRHFWAEGYYVSTVGLNESTIKKYIRDQEKHDIAMDKLTSVEYSDPFKGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 5e-36 63
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 3e-36 63
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 3e-37 59
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 1e-35 57
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 3e-32 51