Gene Information

Name : LAR_0035 (LAR_0035)
Accession : YP_001841031.1
Strain : Lactobacillus reuteri JCM 1112
Genome accession: NC_010609
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding component
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 38636 - 39334 bp
Length : 699 bp
Strand : +
Note : -

DNA sequence : 
ATGATCAAGCTAAAGAACATTAATAAATATTACCGTCAAGGTAGCCAACGTTTTCATGTTCTCCATGATATTAATGTTGA
CATTGAGCAAGGCGAATTAGTAGCAATTATCGGTGAATCTGGGTCAGGGAAATCAACTTTGATTAATATTGTGGGCTTTC
TTGATGATGATTTTGAGGGAACATACTTCTACCAAAATCACCCAATCCATGATTATTCGCGAAAGCAGTTTTCAAATTTA
CGAAATCAAAATGTCGGTTTTGTTTTTCAAAATTTCAAACTGCTACGTGGGTCAACCGTTGCAGATAATGTTGGATTACC
CTTGCTATATGCAGGAAAACGACGCCGTGAAATTGGCGAACGGGTTTCTGAAGTCTTAGAGCAAGTTGGTTTAGCCGGAT
ATGAAGATCAATTCCCTAAAAACATGTCTGGTGGTCAACAACAAAGAGTATCTATTGCCCGGGCAATATCAACGAACCCG
AAATTTTTAATTGCTGACGAACCAACGGGAGCGCTTGATACGGAAACAAGCCAAGAAGTTATGAATCTTTTTAAGCGATT
GAATCACGAAGAAGGAACAACGATTATTATGGTTACCCATGATCCTCATGTCGCTGAACAATGTGACCGAATAATTAAAA
TTATTGATGGTCGAATTGTGAGTGACAGTAAAGGCGGTGAATATCATGCAGACAATTGA

Protein sequence : 
MIKLKNINKYYRQGSQRFHVLHDINVDIEQGELVAIIGESGSGKSTLINIVGFLDDDFEGTYFYQNHPIHDYSRKQFSNL
RNQNVGFVFQNFKLLRGSTVADNVGLPLLYAGKRRREIGERVSEVLEQVGLAGYEDQFPKNMSGGQQQRVSIARAISTNP
KFLIADEPTGALDTETSQEVMNLFKRLNHEEGTTIIMVTHDPHVAEQCDRIIKIIDGRIVSDSKGGEYHADN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-35 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-36 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-36 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LAR_0035 YP_001841031.1 ABC transporter ATP-binding component NC_012469.1.7686878. Protein 2e-45 49
LAR_0035 YP_001841031.1 ABC transporter ATP-binding component NC_008702.1.4606598. Protein 1e-33 43
LAR_0035 YP_001841031.1 ABC transporter ATP-binding component NC_012469.1.7686946. Protein 4e-33 41
LAR_0035 YP_001841031.1 ABC transporter ATP-binding component CP001581.1.gene798.p Protein 4e-32 41
LAR_0035 YP_001841031.1 ABC transporter ATP-binding component NC_012469.1.7685735. Protein 3e-32 41